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We consider large linear and nonlinear fixed point problems, and solution with proximal algorithms. We show that there is a close connection between two seemingly different types of methods from distinct fields: 1) Proximal iterations for…

Numerical Analysis · Computer Science 2019-09-05 Dimitri P. Bertsekas

Fast multipole methods (FMM) were originally developed for accelerating $N$-body problems for particle-based methods. FMM is more than an $N$-body solver, however. Recent efforts to view the FMM as an elliptic Partial Differential Equation…

Numerical Analysis · Mathematics 2016-08-09 Huda Ibeid , Rio Yokota , David Keyes

We present tests of comparison between our versions of the Fast Multipole Algorithm (FMA) and ``classic'' tree-code to evaluate gravitational forces in particle systems. We have optimized the Greengard's original version of FMA allowing for…

Astrophysics · Physics 2016-08-30 R. Capuzzo-Dolcetta , P. Miocchi

Dynamic causal modeling (DCM) is a Bayesian framework to infer directed connections between compartments, and has been used to describe the interactions between underlying neural populations based on functional neuroimaging data. DCM is…

Neurons and Cognition · Quantitative Biology 2021-02-23 Juntang Zhuang , Nicha Dvornek , Sekhar Tatikonda , Xenophon Papademetris , Pamela Ventola , James Duncan

We propose a novel algorithm for supervised dimensionality reduction named Manifold Partition Discriminant Analysis (MPDA). It aims to find a linear embedding space where the within-class similarity is achieved along the direction that is…

Machine Learning · Computer Science 2020-11-24 Yang Zhou , Shiliang Sun

We introduce the Fast Free Memory method (FFM), a new fast method for the numerical evaluation of convolution products. Inheriting from the Fast Multipole Method, the FFM is a descent-only and kernel-independent algorithm. We give the…

Numerical Analysis · Mathematics 2019-09-13 Matthieu Aussal , Marc Bakry

In a number of problems in computational physics, a finite sum of kernel functions centered at $N$ particle locations located in a box in three dimensions must be extended by imposing periodic boundary conditions on box boundaries. Even…

Computational Physics · Physics 2015-06-17 Nail A. Gumerov , Ramani Duraiswami

Functional data analysis (FDA) is an important modern paradigm for handling infinite-dimensional data. An important task in FDA is model-based clustering, which organizes functional populations into groups via subpopulation structures. The…

Computation · Statistics 2017-02-14 Hien D Nguyen , Geoffrey J McLachlan , Jeremy F P Ullmann , Andrew L Janke

The derivative-free projection method (DFPM) is an efficient algorithm for solving monotone nonlinear equations. As problems grow larger, there is a strong demand for speeding up the convergence of DFPM. This paper considers the application…

Optimization and Control · Mathematics 2026-01-23 Jiachen Jin , Hongxia Wang , Kangkang Deng

The persistence diagram, which describes the topological features of a dataset, is a key descriptor in Topological Data Analysis. The "Discrete Morse Sandwich" (DMS) method has been reported to be the most efficient algorithm for computing…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-27 Eve Le Guillou , Pierre Fortin , Julien Tierny

This paper introduces a versatile approach for computing the risk of collision specifically tailored for scenarios featuring low relative encounter velocities, but with potential applicability across a wide range of situations. The…

The distributed adaptive signal fusion (DASF) framework allows to solve spatial filtering optimization problems in a distributed and adaptive fashion over a bandwidth-constrained wireless sensor network. The DASF algorithm requires each…

Signal Processing · Electrical Eng. & Systems 2025-05-02 Cem Ates Musluoglu , Alexander Bertrand

There is an ongoing effort to develop tools that apply distributed computational resources to tackle large problems or reduce the time to solve them. In this context, the Alternating Direction Method of Multipliers (ADMM) arises as a method…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-03-09 Ning Hao , AmirReza Oghbaee , Mohammad Rostami , Nate Derbinsky , José Bento

In this paper, we propose a fast multipole method (FMM) for 3-D linearized Poisson-Boltzmann (PB) equation in layered media. The main framework of the algorithm is analogous to the FMM for Helmholtz and Laplace equation in layered media…

Numerical Analysis · Mathematics 2020-12-02 Bo Wang , Wen Zhong Zhang , Wei Cai

A low-latency and energy-efficient tensor algebra accelerator design must optimize how data movement and operations are scheduled (i.e., mapped) in the accelerator architecture. A key mapping optimization is fusion, meaning holding data…

Hardware Architecture · Computer Science 2026-05-05 Tanner Andrulis , Michael Gilbert , Vivienne Sze , Joel S. Emer

While fast multipole methods (FMMs) are in widespread use for the rapid evaluation of potential fields governed by the Laplace, Helmholtz, Maxwell or Stokes equations, their coupling to high-order quadratures for evaluating layer potentials…

Numerical Analysis · Mathematics 2021-04-26 Leslie Greengard , Michael O'Neil , Manas Rachh , Felipe Vico

Optimal transmission switching (OTS) improves optimal power flow (OPF) by selectively opening transmission lines, but its mixed-integer formulation increases computational complexity, especially on large grids. To deal with this, we propose…

Systems and Control · Electrical Eng. & Systems 2025-07-24 Minsoo Kim , Jip Kim

Symbolic encoding has been used in multi-operator learning as a way to embed additional information for distinct time-series data. For spatiotemporal systems described by time-dependent partial differential equations, the equation itself…

Machine Learning · Computer Science 2024-09-19 Derek Jollie , Jingmin Sun , Zecheng Zhang , Hayden Schaeffer

Exascale systems are predicted to have approximately one billion cores, assuming Gigahertz cores. Limitations on affordable network topologies for distributed memory systems of such massive scale bring new challenges to the current parallel…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-05-27 Huda Ibeid , Rio Yokota , David Keyes

Coupled matrix and tensor factorizations (CMTF) are frequently used to jointly analyze data from multiple sources, also called data fusion. However, different characteristics of datasets stemming from multiple sources pose many challenges…

Machine Learning · Computer Science 2021-04-21 Carla Schenker , Jeremy E. Cohen , Evrim Acar