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Developing artificial intelligence (AI) for clinical research requires a comprehensive data foundation that supports model training and rigorous evaluation. Here, we introduce TrialPanorama, a large-scale structured resource that aggregates…

Artificial Intelligence · Computer Science 2025-12-17 Zifeng Wang , Jiacheng Lin , Qiao Jin , Junyi Gao , Jathurshan Pradeepkumar , Pengcheng Jiang , Zhiyong Lu , Jimeng Sun

Scene labeling is a challenging classification problem where each input image requires a pixel-level prediction map. Recently, deep-learning-based methods have shown their effectiveness on solving this problem. However, we argue that the…

Computer Vision and Pattern Recognition · Computer Science 2017-06-12 Zhe Wang , Hongsheng Li , Wanli Ouyang , Xiaogang Wang

Proteins perform critical processes in all living systems: converting solar energy into chemical energy, replicating DNA, as the basis of highly performant materials, sensing and much more. While an incredible range of functionality has…

Biomolecules · Quantitative Biology 2021-09-29 Leonardo V. Castorina , Rokas Petrenas , Kartic Subr , Christopher W. Wood

Spectroscopy is a powerful analytical technique for characterizing matter across physical and biological realms1-5. However, its fundamental principle necessitates specialized instrumentation per physical phenomena probed, limiting broad…

Machine Learning · Computer Science 2024-07-24 Yanmin Zhu , Loza F. Tadesse

We introduce SciEvalKit, a unified benchmarking toolkit designed to evaluate AI models for science across a broad range of scientific disciplines and task capabilities. Unlike general-purpose evaluation platforms, SciEvalKit focuses on the…

This paper presents Soundbay, an open-source Python framework that allows bio-acoustics and machine learning researchers to implement and utilize deep learning-based algorithms for acoustic audio analysis. Soundbay provides an easy and…

In fluorescence microscopy, spectral unmixing aims to recover individual fluorophore concentrations from spectral images that capture mixed fluorophore emissions. Since classical methods operate pixel-wise and rely on least-squares fitting,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-26 Federico Carrara , Talley Lambert , Mehdi Seifi , Florian Jug

The past decade witnesses a rapid development in the measurement and monitoring technologies for food science. Among these technologies, spectroscopy has been widely used for the analysis of food quality, safety, and nutritional properties.…

Machine Learning · Computer Science 2022-02-07 Huanle Zhang , Nicharee Wisuthiphaet , Hemiao Cui , Nitin Nitin , Xin Liu , Qing Zhao

Computational complexity is a key limitation of genomic analyses. Thus, over the last 30 years, researchers have proposed numerous fast heuristic methods that provide computational relief. Comparing genomic sequences is one of the most…

We introduce DeepQuantum, an open-source, PyTorch-based software platform for quantum machine learning and photonic quantum computing. This AI-enhanced framework enables efficient design and execution of hybrid quantum-classical models and…

Designing and implementing efficient, provably correct parallel neural network processing is challenging. Existing high-level parallel abstractions like MapReduce are insufficiently expressive while low-level tools like MPI and Pthreads…

Machine Learning · Computer Science 2016-06-21 Maohua Zhu , Liu Liu , Chao Wang , Yuan Xie

Continual learning enables AI systems to acquire new knowledge while retaining previously learned information. While traditional unimodal methods have made progress, the rise of Multimodal Large Language Models (MLLMs) brings new challenges…

Computer Vision and Pattern Recognition · Computer Science 2026-01-01 Haiyang Guo , Fei Zhu , Hongbo Zhao , Fanhu Zeng , Wenzhuo Liu , Shijie Ma , Da-Han Wang , Xu-Yao Zhang

Large language models hold promise as scientific assistants, yet existing agents either rely solely on algorithm evolution or on deep research in isolation, both of which face critical limitations. Pure algorithm evolution, as in…

Artificial Intelligence · Computer Science 2025-10-08 Gang Liu , Yihan Zhu , Jie Chen , Meng Jiang

Evaluating how Large Language Models (LLMs) handle complex, specialized knowledge remains a critical challenge. We address this through the lens of climate change by introducing CLINB, a benchmark that assesses models on open-ended,…

Deep learning is a branch of artificial intelligence where networks of simple interconnected units are used to extract patterns from data in order to solve complex problems. Deep learning algorithms have shown groundbreaking performance in…

Computer Vision and Pattern Recognition · Computer Science 2018-02-27 Maciej A. Mazurowski , Mateusz Buda , Ashirbani Saha , Mustafa R. Bashir

The knowledge of potentially druggable binding sites on proteins is an important preliminary step towards the discovery of novel drugs. The computational prediction of such areas can be boosted by following the recent major advances in the…

Biomolecules · Quantitative Biology 2021-02-17 Stelios K. Mylonas , Apostolos Axenopoulos , Petros Daras

In the past decade, deep neural networks have achieved significant progress in point cloud learning. However, collecting large-scale precisely-annotated training data is extremely laborious and expensive, which hinders the scalability of…

Computer Vision and Pattern Recognition · Computer Science 2024-06-18 Aoran Xiao , Xiaoqin Zhang , Ling Shao , Shijian Lu

As AI evolves, collaboration among heterogeneous models helps overcome data scarcity by enabling knowledge transfer across institutions and devices. Traditional Federated Learning (FL) only supports homogeneous models, limiting…

Machine Learning · Computer Science 2025-06-05 Jianqing Zhang , Xinghao Wu , Yanbing Zhou , Xiaoting Sun , Qiqi Cai , Yang Liu , Yang Hua , Zhenzhe Zheng , Jian Cao , Qiang Yang

The powerful reasoning of modern Vision Language Models open a new frontier for advanced personalization study. However, progress in this area is critically hampered by the lack of suitable benchmarks. To address this gap, we introduce…

Computer Vision and Pattern Recognition · Computer Science 2026-02-24 Xia Hu , Honglei Zhuang , Brian Potetz , Alireza Fathi , Bo Hu , Babak Samari , Howard Zhou