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Computational phenotyping is essential for biomedical research but often requires significant time and resources, especially since traditional methods typically involve extensive manual data review. While machine learning and natural…

Computation and Language · Computer Science 2025-07-08 Sarah Pungitore , Shashank Yadav , Vignesh Subbian

Computational phenotyping is a central informatics activity with resulting cohorts supporting a wide variety of applications. However, it is time-intensive because of manual data review and limited automation. Since LLMs have demonstrated…

Quantitative Methods · Quantitative Biology 2025-08-18 Sarah Pungitore , Shashank Yadav , Molly Douglas , Jarrod Mosier , Vignesh Subbian

Existing long-context benchmarks for Large Language Models (LLMs) focus on evaluating comprehension of long inputs, while overlooking the evaluation of long reasoning abilities. To address this gap, we introduce LongReasonArena, a benchmark…

Computation and Language · Computer Science 2025-08-28 Jiayu Ding , Shuming Ma , Lei Cui , Nanning Zheng , Furu Wei

Integrating large language models (LLMs) like DeepSeek R1 into healthcare requires rigorous evaluation of their reasoning alignment with clinical expertise. This study assesses DeepSeek R1's medical reasoning against expert patterns using…

Computation and Language · Computer Science 2025-04-02 Birger Moell , Fredrik Sand Aronsson , Sanian Akbar

This paper investigates the mathematical reasoning capabilities of large language models (LLMs) using 50 newly constructed high-school-level word problems. Unlike prior studies that focus solely on answer correctness, we rigorously analyze…

Artificial Intelligence · Computer Science 2025-02-24 Johan Boye , Birger Moell

We introduce Phi-4-reasoning, a 14-billion parameter reasoning model that achieves strong performance on complex reasoning tasks. Trained via supervised fine-tuning of Phi-4 on carefully curated set of "teachable" prompts-selected for the…

Large language models (LLMs) have shown remarkable progress in reasoning abilities and general natural language processing (NLP) tasks, yet their performance on Arabic data, characterized by rich morphology, diverse dialects, and complex…

Computation and Language · Computer Science 2025-12-16 Ahmed Hasanaath , Aisha Alansari , Ahmed Ashraf , Chafik Salmane , Hamzah Luqman , Saad Ezzini

How far are Large Language Models (LLMs) in performing deep relational reasoning? In this paper, we evaluate and compare the reasoning capabilities of three cutting-edge LLMs, namely, DeepSeek-R1, DeepSeek-V3 and GPT-4o, through a suite of…

Artificial Intelligence · Computer Science 2025-07-01 Chi Chiu So , Yueyue Sun , Jun-Min Wang , Siu Pang Yung , Anthony Wai Keung Loh , Chun Pong Chau

Understanding a program's runtime reasoning behavior, meaning how intermediate states and control flows lead to final execution results, is essential for reliable code generation, debugging, and automated reasoning. Although large language…

Software Engineering · Computer Science 2025-12-02 Mohammad Abdollahi , Khandaker Rifah Tasnia , Soumit Kanti Saha , Jinqiu Yang , Song Wang , Hadi Hemmati

State-of-the-art reasoning LLMs are powerful problem solvers, but they still occasionally make mistakes. However, adopting AI models in risk-sensitive domains often requires error rates near 0%. To address this gap, we propose collaboration…

Artificial Intelligence · Computer Science 2025-07-22 Michael J. Zellinger , Matt Thomson

Large Language Models (LLMs) have exhibited remarkable reasoning capabilities, achieving impressive results across a wide range of tasks. Despite these advances, significant reasoning failures persist, occurring even in seemingly simple…

Artificial Intelligence · Computer Science 2026-02-09 Peiyang Song , Pengrui Han , Noah Goodman

Large language models (LLMs) solve complex problems yet fail on simpler variants, suggesting they achieve correct outputs through mechanisms fundamentally different from human reasoning. To understand this gap, we synthesize cognitive…

Recent advances in Large Language Models (LLMs) have intensified the debate surrounding the fundamental nature of their reasoning capabilities. While achieving high performance on benchmarks such as GPQA and MMLU, these models exhibit…

Artificial Intelligence · Computer Science 2025-01-24 Santosh Kumar Radha , Oktay Goktas

Currently, many large language models (LLMs) are utilized for software engineering tasks such as code generation. The emergence of more advanced models known as large reasoning models (LRMs), such as OpenAI's o3, DeepSeek R1, and Qwen3.…

Software Engineering · Computer Science 2025-09-18 Kevin Halim , Sin G. Teo , Ruitao Feng , Zhenpeng Chen , Yang Gu , Chong Wang , Yang Liu

Navigating the complexities of physics reasoning has long been a difficult task for Large Language Models (LLMs), requiring a synthesis of profound conceptual understanding and adept problem-solving techniques. In this study, we investigate…

Computation and Language · Computer Science 2025-07-04 Nifu Dan , Yujun Cai , Yiwei Wang

Recent advancements in Large Reasoning Models (LRMs), such as OpenAI's o1/o3 and DeepSeek-R1, have demonstrated remarkable performance in specialized reasoning tasks through human-like deliberative thinking and long chain-of-thought…

Artificial Intelligence · Computer Science 2025-11-20 Weixiang Zhao , Xingyu Sui , Jiahe Guo , Yulin Hu , Yang Deng , Yanyan Zhao , Xuda Zhi , Yongbo Huang , Hao He , Wanxiang Che , Ting Liu , Bing Qin

Large Language Models (LLMs) have shown impressive performance in reasoning tasks. However, LLMs tend to generate excessively long reasoning content, leading to significant computational overhead. Our observations indicate that even on…

Computation and Language · Computer Science 2025-05-21 Guochao Jiang , Guofeng Quan , Zepeng Ding , Ziqin Luo , Dixuan Wang , Zheng Hu

Large Language Models (LLMs) have demonstrated remarkable efficiency in tackling various tasks based on human instructions, but studies reveal that they often struggle with tasks requiring reasoning, such as math or physics. This limitation…

Computation and Language · Computer Science 2024-10-08 Ruoyu Wang , Xiaoxuan Li , Lina Yao

The rapid advancement of Large Language Models (LLMs) in the realm of mathematical reasoning necessitates comprehensive evaluations to gauge progress and inspire future directions. Existing assessments predominantly focus on problem-solving…

Computation and Language · Computer Science 2024-06-05 Xiaoyuan Li , Wenjie Wang , Moxin Li , Junrong Guo , Yang Zhang , Fuli Feng

Recent studies show that the reasoning capabilities of Large Language Models (LLMs) can be improved by applying Reinforcement Learning (RL) to question-answering (QA) tasks in areas such as math and coding. With a long context length, LLMs…

Computation and Language · Computer Science 2025-10-17 Stephen Chung , Wenyu Du , Jie Fu
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