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Software, and software source code in particular, is widely used in modern research. It must be properly archived, referenced, described and cited in order to build a stable and long lasting corpus of scientic knowledge. In this article we…

Digital Libraries · Computer Science 2020-09-16 Roberto Di Cosmo

With the increased interest in computational sciences, machine learning (ML), pattern recognition (PR) and big data, governmental agencies, academia and manufacturers are overwhelmed by the constant influx of new algorithms and techniques…

Software Engineering · Computer Science 2017-07-28 André Anjos , Laurent El-Shafey , Sébastien Marcel

Being able to duplicate published research results is an important process of conducting research whether to build upon these findings or to compare with them. This process is called "replicability" when using the original authors'…

Digital Libraries · Computer Science 2020-05-07 Nicolas Bonneel , David Coeurjolly , Julie Digne , Nicolas Mellado

Many software developers rely on open source software for developing their applications and writing their source codes. Measuring an independent project's overall productivity is still an open problem for many technology companies. In this…

Software Engineering · Computer Science 2022-03-30 Sairamvinay Vijayaraghavan , Jinxiao Song , Terry Guan , Seongwoo Choi , Sutej Kulkarni

Faced with over 100M open source projects most empirical investigations select a subset. Most research papers in leading venues investigated filtering projects by some measure of popularity with explicit or implicit arguments that unpopular…

Software Engineering · Computer Science 2024-01-19 Addi Malviya-Thakur , Audris Mockus

In open-source software development environments; textual, numerical and relationship-based data generated are of interest to researchers. Various data sets are available for this data, which is frequently used in areas such as software…

Software Engineering · Computer Science 2020-10-01 Abdulkadir Şeker , Banu Diri , Halil Arslan

Scientific knowledge is a key driver of technological innovation, shaping industrial development and policy decisions worldwide. Understanding how patents incorporate scientific research is essential for assessing the role of academic…

Digital Libraries · Computer Science 2025-08-05 Abdelghani Maddi , Ahmad Yaman Abdin , Francesco Fdp de Pretis

Context: Self-admitted technical debt (SATD) occurs when developers acknowledge shortcuts in code. In scientific software (SSW), such debt poses unique risks to the validity and reproducibility of results. Objective: This study aims to…

Software Engineering · Computer Science 2026-01-19 Eric L. Melin , Nasir U. Eisty , Gregory Watson , Addi Malviya-Thakur

Are others using software you've written in their research and citing it as you want it to be cited? Software can be cited in different ways, some good, and some not good at all for tracking and counting citations in indexers such as ADS…

Instrumentation and Methods for Astrophysics · Physics 2022-12-27 Alice Allen

Knowledge about software used in scientific investigations is important for several reasons, for instance, to enable an understanding of provenance and methods involved in data handling. However, software is usually not formally cited, but…

Information Retrieval · Computer Science 2021-08-23 David Schindler , Felix Bensmann , Stefan Dietze , Frank Krüger

How many times have you tried to re-implement a past CAV tool paper, and failed? Reliably reproducing published scientific discoveries has been acknowledged as a barrier to scientific progress for some time but there remains only a small…

Logic in Computer Science · Computer Science 2015-02-10 Tom Crick , Benjamin A. Hall , Samin Ishtiaq

Open source projects play a significant role in software production. Most of the software projects reuse and build upon the existing open source projects and libraries. While reusing is a time and cost-saving strategy, some of the key…

Software Engineering · Computer Science 2022-08-03 Javad Ghofrani , Paria Heravi , Kambiz A. Babaei , Mohammad Soorati

Although repeatability and reproducibility are essential in science, failed attempts to replicate results across diverse fields made some scientists argue for a reproducibility crisis. In response, several high-profile venues within…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-21 Mohammad Reza Saleh Sedghpour , Alessandro Vittorio Papadopoulos , Cristian Klein , Johan Tordsson

The way science is currently practiced shows conclusions but hides how they were reached. Researchers work privately, polish their results, publish a finished paper, and defend it. Errors are punished by retraction rather than corrected by…

Digital Libraries · Computer Science 2026-04-14 Sergey V. Samsonau

Software is vital for the advancement of biology and medicine. Analysis of usage and impact metrics can help developers determine user and community engagement, justify additional funding, encourage additional use, identify unanticipated…

We present PORT, a software platform for local data extraction and analysis of digital trace data. While digital trace data collected by private and public parties hold a huge potential for social-scientific discovery, their most useful…

Cryptography and Security · Computer Science 2021-10-12 Laura Boeschoten , Adriënne Mendrik , Emiel van der Veen , Jeroen Vloothuis , Haili Hu , Roos Voorvaart , Daniel Oberski

Ensuring the reproducibility of scientific work is crucial as it allows the consistent verification of scientific claims and facilitates the advancement of knowledge by providing a reliable foundation for future research. However,…

Software Engineering · Computer Science 2025-04-14 Lázaro Costa , Susana Barbosa , Jácome Cunha

Despite the importance of scientific software for research, it is often not formally recognized and rewarded. This is especially true for foundational libraries, which are hidden below packages visible to the users (and thus doubly hidden,…

The trend toward open science increases the pressure on authors to provide access to the source code and data they used to compute the results reported in their scientific papers. Since sharing materials reproducibly is challenging, several…

Digital Libraries · Computer Science 2020-07-15 Markus Konkol , Daniel Nüst , Laura Goulier

Reusable microservice artefacts are often deployed as black or grey boxes, with little concern for their properties and quality, beyond a syntactical interface description. This leads application developers to chaotic and opportunistic…

Software Engineering · Computer Science 2020-06-03 Panagiotis Gkikopoulos , Josef Spillner , Valerio Schiavoni