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Rearranging the rows or columns of a sparse matrix using an appropriate ordering can significantly reduce fill-ins, i.e., new nonzeros introduced during matrix factorization, decreasing memory usage and runtime. However, finding an ordering…

Machine Learning · Computer Science 2026-05-19 Ziwei Li , Tao Yuan , Fangfang Liu , Shuzi Niu , Huiyuan Li , Wenjia Wu

General Matrix Multiplication (GEMM) is a critical operation underpinning a wide range of applications in high-performance computing (HPC) and artificial intelligence (AI). The emergence of hardware optimized for low-precision arithmetic…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-08-21 Qiao Zhang , Rabab Alomairy , Dali Wang , Zhuowei Gu , Qinglei Cao

Sparse matrix-dense matrix multiplication (SpMM) is a critical kernel in scientific computing, graph analytics, and machine learning, whose performance is often constrained by memory bandwidth. In this work, we investigate the applicability…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-09 Matthew Qian , Yahia Ramadan , Suhita Anubha , Ariful Azad

Graph Neural Networks (GNNs) have achieved significant improvements in various domains. Sparse Matrix-Matrix multiplication (SpMM) is a fundamental operator in GNNs, which performs a multiplication between a sparse matrix and a dense…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-08 Guyue Huang , Guohao Dai , Yu Wang , Huazhong Yang

Sparse matrix-vector multiplication (SpMV) is a fundamental operation in scientific computing, data analysis, and machine learning. When the data being processed are sensitive, preserving privacy becomes critical, and homomorphic encryption…

Cryptography and Security · Computer Science 2026-03-06 Yang Gao , Gang Quan , Wujie Wen , Scott Piersall , Qian Lou , Liqiang Wang

We discuss R package SQUAREM for accelerating iterative algorithms which exhibit slow, monotone convergence. These include the well-known expectation-maximization algorithm, majorize-minimize (MM), and other EM-like algorithms such as…

Computation · Statistics 2020-03-13 Yu Du , Ravi Varadhan

Sparse matrix multiplication is traditionally performed in memory and scales to large matrices using the distributed memory of multiple nodes. In contrast, we scale sparse matrix multiplication beyond memory capacity by implementing sparse…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-15 Da Zheng , Disa Mhembere , Vince Lyzinski , Joshua Vogelstein , Carey E. Priebe , Randal Burns

Sparse linear algebra kernels play a critical role in numerous applications, covering from exascale scientific simulation to large-scale data analytics. Offloading linear algebra kernels on one GPU will no longer be viable in these…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-19 Jieyang Chen , Chenhao Xie , Jesun S Firoz , Jiajia Li , Shuaiwen Leon Song , Kevin Barker , Mark Raugas , Ang Li

Sparse Matrix-matrix Multiplication (SpMM) and Sampled Dense-dense Matrix Multiplication (SDDMM) are important sparse operators in scientific computing and deep learning. Tensor Core Units (TCUs) enhance modern accelerators with superior…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-12-17 Jinliang Shi , Shigang Li , Youxuan Xu , Rongtian Fu , Xueying Wang , Tong Wu

Graphical models play an important role in neuroscience studies, particularly in brain connectivity analysis. Typically, observations/samples are from several heterogenous groups and the group membership of each observation/sample is…

Methodology · Statistics 2021-10-12 Dong Liu , Changwei Zhao , Yong He , Lei Liu , Ying Guo , Xinsheng Zhang

We develop and analyze new scheduling algorithms for solving sparse triangular linear systems (SpTRSV) in parallel. Our approach produces highly efficient synchronous schedules for the forward- and backward-substitution algorithm. Compared…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-06 Toni Böhnlein , Pál András Papp , Raphael S. Steiner , Christos K. Matzoros , A. N. Yzelman

Hierarchical Matrix (H-matrix) is an approximation technique which splits a target dense matrix into multiple submatrices, and where a selected portion of submatrices are low-rank approximated. The technique substantially reduces both time…

Mathematical Software · Computer Science 2019-11-04 Rise Ooi , Takeshi Iwashita , Takeshi Fukaya , Akihiro Ida , Rio Yokota

Sparse matrix multiplication is an important kernel for large-scale graph processing and other data-intensive applications. In this paper, we implement various asynchronous, RDMA-based sparse times dense (SpMM) and sparse times sparse…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-06 Benjamin Brock , Aydın Buluç , Katherine Yelick

Sparse matrix-vector multiplication (SpMV) is crucial in computational science, engineering, and machine learning. Despite substantial efforts to improve SpMV performance on GPUs through various techniques, issues related to data locality,…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-19 Xing Cong , Fukai Sun , Yifan Chen , Chenhao Xie* , Yi Liu , Depei Qian

Several manufacturers have already started to commercialize near-bank Processing-In-Memory (PIM) architectures. Near-bank PIM architectures place simple cores close to DRAM banks and can yield significant performance and energy improvements…

Hardware Architecture · Computer Science 2022-05-24 Christina Giannoula , Ivan Fernandez , Juan Gómez-Luna , Nectarios Koziris , Georgios Goumas , Onur Mutlu

Deep learning demonstrates effectiveness across a wide range of tasks. However, the dense and over-parameterized nature of these models results in significant resource consumption during deployment. In response to this issue, weight…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-05 Cong Ma , Du Wu , Zhelang Deng , Jiang Chen , Xiaowen Huang , Jintao Meng , Wenxi Zhu , Bingqiang Wang , Amelie Chi Zhou , Peng Chen , Minwen Deng , Yanjie Wei , Shengzhong Feng , Yi Pan

Fill-ins are new nonzero elements in the summation of the upper and lower triangular factors generated during LU factorization. For large sparse matrices, they will increase the memory usage and computational time, and be reduced through…

Machine Learning · Computer Science 2025-11-13 Ziwei Li , Shuzi Niu , Tao Yuan , Huiyuan Li , Wenjia Wu

Modern computing workloads commonly involve matrix-matrix multiplication (mmul) as a core computing pattern. Coarse-Grained Reconfigurable Arrays (CGRAs) can flexibly and efficiently support it, since they combine operation-level…

Hardware Architecture · Computer Science 2026-04-29 Yuxuan Wang , María José Belda , Fernando Castro , Katzalin Olcoz , David Atienza , Giovanni Ansaloni

Sparse matrix-dense matrix multiplication (SpMM) is a critical kernel in both scientific computing and emerging graph learning workloads. The recent Armv9 architecture introduces Scalable Matrix Extension (SME), enabling tile-based matrix…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-14 Kelun Lei , Hailong Yang , Kaige Zhang , Kejie Ma , Yiqing Wang , Xin You , Yufan Xu , Enrique S. Quintana-Orti , Zhongzhi Luan , Yi Liu , Depei Qian

Modern hardware systems are heavily underutilized when running large-scale graph applications. While many in-memory graph frameworks have made substantial progress in optimizing these applications, we show that it is still possible to…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-01-15 Yunming Zhang , Vladimir Kiriansky , Charith Mendis , Matei Zaharia , Saman Amarasinghe
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