English
Related papers

Related papers: Helix 1.0: An Open-Source Framework for Reproducib…

200 papers

SOL is an open-source library for scalable online learning algorithms, and is particularly suitable for learning with high-dimensional data. The library provides a family of regular and sparse online learning algorithms for large-scale…

Machine Learning · Computer Science 2016-10-31 Yue Wu , Steven C. H. Hoi , Chenghao Liu , Jing Lu , Doyen Sahoo , Nenghai Yu

relentless is an open-source Python package that enables the optimization of objective functions computed using molecular dynamics simulations. It has a high-level, extensible interface for model parametrization; setting up, running, and…

Soft Condensed Matter · Physics 2024-08-07 Adithya N Sreenivasan , C. Levi Petix , Zachary M. Sherman , Michael P. Howard

Lack of transparency has been the Achilles heal of Neural Networks and their wider adoption in industry. Despite significant interest this shortcoming has not been adequately addressed. This study proposes a novel framework called…

Machine Learning · Computer Science 2020-05-04 Thanos Tagaris , Andreas Stafylopatis

In modern data-driven science, reproducibility and reusability are key challenges. Scientists are well skilled in the process from data to publication. Although some publication channels require source code and data to be made accessible,…

Artificial Intelligence · Computer Science 2023-07-14 Romeo Kienzler , Rafflesia Khan , Jerome Nilmeier , Ivan Nesic , Ibrahim Haddad

This paper proposes an interpretable non-model sharing collaborative data analysis method as one of the federated learning systems, which is an emerging technology to analyze distributed data. Analyzing distributed data is essential in many…

Machine Learning · Computer Science 2020-11-10 Akira Imakura , Hiroaki Inaba , Yukihiko Okada , Tetsuya Sakurai

Automating the design of heuristic search methods is an active research field within computer science, artificial intelligence and operational research. In order to make these methods more generally applicable, it is important to eliminate…

Artificial Intelligence · Computer Science 2011-07-28 Edmund Burke , Tim Curtois , Matthew Hyde , Gabriela Ochoa , Jose A. Vazquez-Rodriguez

In recent years, the research community has raised serious questions about the reproducibility of scientific work. In particular, since many studies include some kind of computing work, reproducibility is also a technological challenge, not…

Software Engineering · Computer Science 2023-08-03 Lázaro Costa , Susana Barbosa , Jácome Cunha

Recent years have seen the development and growth of machine learning in high energy physics. There will be more effort to continue exploring its full potential. To make it easier for researchers to apply existing algorithms and neural…

High Energy Physics - Phenomenology · Physics 2025-12-18 Jing Li , Hao Sun

Deep learning has become popular because of its potential to achieve high accuracy in prediction tasks. However, accuracy is not always the only goal of statistical modelling, especially for models developed as part of scientific research.…

Machine Learning · Computer Science 2021-10-19 Thomas P Quinn , Sunil Gupta , Svetha Venkatesh , Vuong Le

The integration of Artificial Intelligence (AI) into high-stakes domains such as healthcare, finance, and autonomous systems is often constrained by concerns over transparency, interpretability, and trust. While Human-Centered AI (HCAI)…

Human-Computer Interaction · Computer Science 2025-04-29 Chameera De Silva , Thilina Halloluwa , Dhaval Vyas

PySR is an open-source library for practical symbolic regression, a type of machine learning which aims to discover human-interpretable symbolic models. PySR was developed to democratize and popularize symbolic regression for the sciences,…

Instrumentation and Methods for Astrophysics · Physics 2023-05-08 Miles Cranmer

Despite the explosion of interest in healthcare AI research, the reproducibility and benchmarking of those research works are often limited due to the lack of standard benchmark datasets and diverse evaluation metrics. To address this…

Machine Learning · Computer Science 2021-01-13 Yue Zhao , Zhi Qiao , Cao Xiao , Lucas Glass , Jimeng Sun

Increasingly, artificial intelligence (AI) and machine learning (ML) are used in eScience applications [9]. While these approaches have great potential, the literature has shown that ML-based approaches frequently suffer from results that…

Machine Learning · Computer Science 2024-07-03 Zhiwei Li , Carl Kesselman , Mike D'Arch , Michael Pazzani , Benjamin Yizing Xu

The field of machine learning (ML) has witnessed significant advancements in recent years. However, many existing algorithms lack interpretability and struggle with high-dimensional and imbalanced data. This paper proposes SPINEX, a novel…

Machine Learning · Computer Science 2024-03-26 M. Z. Naser , M. K. albashiti , A. Z. Naser

The TELOS Collaboration is committed to producing and analysing lattice data reproducibly, and sharing its research openly. In this document, we set out the ways that we make this happen, where there is scope for improvement, and how we…

High Energy Physics - Lattice · Physics 2025-04-03 Ed Bennett

In the era of data-driven science, conducting computational experiments that involve analysing large datasets using heterogeneous computational clusters, is part of the everyday routine for many scientists. Moreover, to ensure the…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-23 Thanasis Vergoulis , Konstantinos Zagganas , Loukas Kavouras , Martin Reczko , Stelios Sartzetakis , Theodore Dalamagas

Many research directions in machine learning, particularly in deep learning, involve complex, multi-stage experiments, commonly involving state-mutating operations acting on models along multiple paths of execution. Although machine…

Software Engineering · Computer Science 2020-06-16 Michela Paganini , Jessica Zosa Forde

As enterprise data grows in size and complexity, column-level data lineage, which records the creation, transformation, and reference of each column in the warehouse, has been the key to effective data governance that assists tasks like…

Databases · Computer Science 2025-05-30 Shi Heng Zhang , Zhengjie Miao , Jiannan Wang

Digital computational outputs are now ubiquitous in the research workflow and the way in which these data are stored and cataloged is becoming more standardized across fields of research. However, even with accessible data and code, the…

Digital Libraries · Computer Science 2025-08-19 Sabar Dasgupta , Paul Nuyujukian

TensorFlow is an interface for expressing machine learning algorithms, and an implementation for executing such algorithms. A computation expressed using TensorFlow can be executed with little or no change on a wide variety of heterogeneous…