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The addition of syntax-aware decoding in Neural Machine Translation (NMT) systems requires an effective tree-structured neural network, a syntax-aware attention model and a language generation model that is sensitive to sentence structure.…
The spatial location of cells within tissues and organs is crucial for the manifestation of their specific functions.Spatial transcriptomics technology enables comprehensive measurement of the gene expression patterns in tissues while…
Adversarial attacks pose a significant challenge to deploying deep learning models in safety-critical applications. Maintaining model robustness while ensuring interpretability is vital for fostering trust and comprehension in these models.…
Medical image segmentation is essential for clinical diagnosis and treatment planning. Although transformer-based methods have achieved remarkable results, their high computational cost hinders clinical deployment. To address this issue, we…
This study proposes a novel approach for dynamic load balancing in Software-Defined Networks (SDNs) using a Transformer-based Deep Q-Network (DQN). Traditional load balancing mechanisms, such as Round Robin (RR) and Weighted Round Robin…
Today's deep learning systems deliver high performance based on end-to-end training. While they deliver strong performance, these systems are hard to interpret. To address this issue, we propose Semantic Bottleneck Networks (SBN): deep…
While current state-of-the-art NMT models, such as RNN seq2seq and Transformers, possess a large number of parameters, they are still shallow in comparison to convolutional models used for both text and vision applications. In this work we…
Inferring gene regulatory networks (GRNs) from single-cell RNA sequencing (scRNA-seq) data is a complex challenge that requires capturing the intricate relationships between genes and their regulatory interactions. In this study, we tackle…
Accurate segmentation of the stroke lesions using magnetic resonance imaging (MRI) is associated with difficulties due to the complicated anatomy of the brain and the different properties of the lesions. This study introduces the…
Deep Reinforcement Learning (DRL) has achieved impressive success in many applications. A key component of many DRL models is a neural network representing a Q function, to estimate the expected cumulative reward following a state-action…
Accurate segmentation of the heart is essential for personalized blood flow simulations and surgical intervention planning. Segmentations need to be accurate in every spatial dimension, which is not ensured by segmenting data slice by…
Transformers achieve promising performance in document understanding because of their high effectiveness and still suffer from quadratic computational complexity dependency on the sequence length. General efficient transformers are…
Dominant sequence models like the Transformer represent structure implicitly through dense attention weights, incurring quadratic complexity. We propose RewriteNets, a novel neural architecture built on an alternative paradigm: explicit,…
The recent vision transformer(i.e.for image classification) learns non-local attentive interaction of different patch tokens. However, prior arts miss learning the cross-scale dependencies of different pixels, the semantic correspondence of…
Accurate fluence map prediction is essential in intensity-modulated radiation therapy (IMRT) to maximize tumor coverage while minimizing dose to healthy tissues. Conventional optimization is time-consuming and dependent on planner…
Semantic segmentation of brain tumors is a fundamental medical image analysis task involving multiple MRI imaging modalities that can assist clinicians in diagnosing the patient and successively studying the progression of the malignant…
Accurate, noninvasive glioma characterization is crucial for effective clinical management. Traditional methods, dependent on invasive tissue sampling, often fail to capture the spatial heterogeneity of the tumor. While deep learning has…
X-ray Photoelectron Spectroscopy (XPS) is a crucial technique for material surface analysis, yet interpreting its spectra is often challenging for both human analysts and automated methods due to the prevalence of variable spectral shifts…
Implicit Neural Representations (INRs) have emerged and shown their benefits over discrete representations in recent years. However, fitting an INR to the given observations usually requires optimization with gradient descent from scratch,…
Despite their original goal to jointly learn to align and translate, Neural Machine Translation (NMT) models, especially Transformer, are often perceived as not learning interpretable word alignments. In this paper, we show that NMT models…