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Object-centric representations form the basis of human perception, and enable us to reason about the world and to systematically generalize to new settings. Currently, most works on unsupervised object discovery focus on slot-based…

Machine Learning · Computer Science 2022-11-21 Sindy Löwe , Phillip Lippe , Maja Rudolph , Max Welling

We introduce a novel variational autoencoder (VAE) architecture that can generate realistic and diverse high energy physics events. The model we propose utilizes several techniques from VAE literature in order to simulate high fidelity jet…

High Energy Physics - Phenomenology · Physics 2020-09-11 Kosei Dohi

Stacked Auto-Encoder (SAE) is a kind of deep learning algorithm for unsupervised learning. Which has multi layers that project the vector representation of input data into a lower vector space. These projection vectors are dense…

Computer Vision and Pattern Recognition · Computer Science 2016-10-11 Fei Hu , Changjiu Pu , Haowei Gao , Mengzi Tang , Li Li

We introduce a novel masked graph autoencoder (MGAE) framework to perform effective learning on graph structure data. Taking insights from self-supervised learning, we randomly mask a large proportion of edges and try to reconstruct these…

Machine Learning · Computer Science 2022-01-10 Qiaoyu Tan , Ninghao Liu , Xiao Huang , Rui Chen , Soo-Hyun Choi , Xia Hu

This paper explores image caption generation using conditional variational auto-encoders (CVAEs). Standard CVAEs with a fixed Gaussian prior yield descriptions with too little variability. Instead, we propose two models that explicitly…

Computer Vision and Pattern Recognition · Computer Science 2017-11-21 Liwei Wang , Alexander G. Schwing , Svetlana Lazebnik

Machine Learning on graph-structured data is an important and omnipresent task for a vast variety of applications including anomaly detection and dynamic network analysis. In this paper, a deep generative model is introduced to capture…

Machine Learning · Computer Science 2018-09-12 Mahdi Khodayar , Saeed Mohammadi , Mohammad Khodayar , Jianhui Wang , Guangyi Liu

We introduce Cloud Model Characteristic Function Auto-Encoder (CMCFAE), a novel generative model that integrates the cloud model into the Wasserstein Auto-Encoder (WAE) framework. By leveraging the characteristic functions of the cloud…

Machine Learning · Computer Science 2025-08-07 Biao Hu , Guoyin Wang

Scientific archives now contain hundreds of petabytes of data across genomics, ecology, climate, and molecular biology that could reveal undiscovered patterns if systematically analyzed at scale. Large-scale, weakly-supervised datasets in…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Samuel Stevens , Jacob Beattie , Tanya Berger-Wolf , Yu Su

The discovery of new materials is often constrained by the need for large labelled datasets or expensive simulations. In this study, we explore the use of Disentangling Autoencoders (DAEs) to learn compact and interpretable representations…

Materials Science · Physics 2025-07-29 Jaehoon Cha , Tingyao Lu , Matthew Walker , Keith T. Butler

Bayesian optimisation in the latent space of a Variational AutoEncoder (VAE) is a powerful framework for optimisation tasks over complex structured domains, such as the space of scientifically interesting molecules. However, existing…

Machine Learning · Computer Science 2025-07-08 Henry B. Moss , Sebastian W. Ober , Tom Diethe

Unsupervised learning can leverage large-scale data sources without the need for annotations. In this context, deep learning-based auto encoders have shown great potential in detecting anomalies in medical images. However, state-of-the-art…

Machine Learning · Computer Science 2018-12-17 David Zimmerer , Simon A. A. Kohl , Jens Petersen , Fabian Isensee , Klaus H. Maier-Hein

Masked autoencoder (MAE) is a promising self-supervised pre-training technique that can improve the representation learning of a neural network without human intervention. However, applying MAE directly to volumetric medical images poses…

Computer Vision and Pattern Recognition · Computer Science 2023-08-24 Jia-Xin Zhuang , Luyang Luo , Hao Chen

Generative models of graphs are well-known, but many existing models are limited in scalability and expressivity. We present a novel sequential graphical variational autoencoder operating directly on graphical representations of data. In…

Machine Learning · Computer Science 2019-12-18 Bowen Jing , Ethan A. Chi , Jillian Tang

High resolution galaxy spectra contain much information about galactic physics, but the high dimensionality of these spectra makes it difficult to fully utilize the information they contain. We apply variational autoencoders (VAEs), a…

Instrumentation and Methods for Astrophysics · Physics 2020-07-13 Stephen K. N. Portillo , John K. Parejko , Jorge R. Vergara , Andrew J. Connolly

Advancements in optical quantum technologies have been enabled by the generation, manipulation, and characterization of light, with identification based on its photon statistics. However, characterizing light and its sources through single…

Quantum Physics · Physics 2024-05-09 Mahesh Bhupati , Abhishek Mall , Anshuman Kumar , Pankaj K. Jha

We present a conditional generative model to learn variation in cell and nuclear morphology and the location of subcellular structures from microscopy images. Our model generalizes to a wide range of subcellular localization and allows for…

Machine Learning · Statistics 2017-05-02 Gregory R. Johnson , Rory M. Donovan-Maiye , Mary M. Maleckar

Deep generative models are increasingly becoming integral parts of the in silico molecule design pipeline and have dual goals of learning the chemical and structural features that render candidate molecules viable while also being flexible…

Biomolecules · Quantitative Biology 2021-06-08 Yair Schiff , Vijil Chenthamarakshan , Karthikeyan Natesan Ramamurthy , Payel Das

In this work, we propose a new generative model that is capable of automatically decoupling global and local representations of images in an entirely unsupervised setting, by embedding a generative flow in the VAE framework to model the…

Computer Vision and Pattern Recognition · Computer Science 2021-03-17 Xuezhe Ma , Xiang Kong , Shanghang Zhang , Eduard Hovy

Variational auto-encoders (VAEs) have proven to be a well suited tool for performing dimensionality reduction by extracting latent variables lying in a potentially much smaller dimensional space than the data. Their ability to capture…

Machine Learning · Statistics 2020-10-23 Clément Chadebec , Clément Mantoux , Stéphanie Allassonnière

Is there really much more to say about sparse autoencoders (SAEs)? Autoencoders in general, and SAEs in particular, represent deep architectures that are capable of modeling low-dimensional latent structure in data. Such structure could…

Machine Learning · Computer Science 2025-06-09 Yin Lu , Xuening Zhu , Tong He , David Wipf