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Bayesian inference and the use of posterior or posterior predictive probabilities for decision making have become increasingly popular in clinical trials. The current practice in Bayesian clinical trials relies on a hybrid…

Methodology · Statistics 2024-04-30 Shirin Golchi , James Willard

The Bayesian approach to data analysis provides a powerful way to handle uncertainty in all observations, model parameters, and model structure using probability theory. Probabilistic programming languages make it easier to specify and fit…

Prompt learning has emerged as an effective technique for fine-tuning large-scale foundation models for downstream tasks. However, conventional prompt learning methods are prone to overfitting and can struggle with out-of-distribution…

Bayesian networks provide an elegant formalism for representing and reasoning about uncertainty using probability theory. Theyare a probabilistic extension of propositional logic and, hence, inherit some of the limitations of propositional…

Artificial Intelligence · Computer Science 2007-05-23 Kristian Kersting , Luc De Raedt

We argue for the use of separate exchangeability as a modeling principle in Bayesian nonparametric (BNP) inference. Separate exchangeability is de facto widely applied in the Bayesian parametric case, e.g., it naturally arises in simple…

Methodology · Statistics 2025-07-29 Giovanni Rebaudo , Qiaohui Lin , Peter Mueller

Uncovering genuine relationships between a response variable of interest and a large collection of covariates is a fundamental and practically important problem. In the context of Gaussian linear models, both the Bayesian and non-Bayesian…

Statistics Theory · Mathematics 2025-04-11 Jeyong Lee , Minwoo Chae , Ryan Martin

Standard Bayesian analyses can be difficult to perform when the full likelihood, and consequently the full posterior distribution, is too complex and difficult to specify or if robustness with respect to data or to model misspecifications…

Methodology · Statistics 2019-01-08 Federica Giummolè , Valentina Mameli , Erlis Ruli , Laura Ventura

The recently developed semi-parametric generalized linear model (SPGLM) offers more flexibility as compared to the classical GLM by including the baseline or reference distribution of the response as an additional parameter in the model.…

Methodology · Statistics 2024-04-09 Entejar Alam , Peter Müller , Paul J. Rathouz

Approximate Bayesian Computation (ABC) is a useful class of methods for Bayesian inference when the likelihood function is computationally intractable. In practice, the basic ABC algorithm may be inefficient in the presence of discrepancy…

Statistics Theory · Mathematics 2015-05-14 Stefano Cabras , Maria Eugenia Castellanos Nueda , Erlis Ruli

Probabilistic programming is an approach to reasoning under uncertainty by encoding inference problems as programs. In order to solve these inference problems, probabilistic programming languages (PPLs) employ different inference…

Programming Languages · Computer Science 2023-05-04 Daniel Lundén , Johannes Borgström , David Broman

Maximum likelihood estimates (MLEs) are asymptotically normally distributed, and this property is used in meta-analyses to test the heterogeneity of estimates, either for a single cluster or for several sub-groups. More recently, MLEs for…

Statistics Theory · Mathematics 2022-02-28 Anthony J. Webster

Probabilistic programming languages, which exist in abundance, are languages that allow users to calculate probability distributions defined by probabilistic programs, by using inference algorithms. However, the underlying inference…

Programming Languages · Computer Science 2026-01-15 Oliver Goldstein , Ohad Kammar

We consider Bayesian inference when only a limited number of noisy log-likelihood evaluations can be obtained. This occurs for example when complex simulator-based statistical models are fitted to data, and synthetic likelihood (SL) method…

Machine Learning · Statistics 2020-03-09 Marko Järvenpää , Michael Gutmann , Aki Vehtari , Pekka Marttinen

This paper gives a generative model of the interpretation of formal logic for data-driven logical reasoning. The key idea is to represent the interpretation as likelihood of a formula being true given a model of formal logic. Using the…

Artificial Intelligence · Computer Science 2022-03-01 Hiroyuki Kido

We introduce a novel variant of BSS machines called Separate Branching BSS machines (S-BSS in short) and develop a Fagin-type logical characterisation for languages decidable in non-deterministic polynomial time by S-BSS machines. We show…

Logic in Computer Science · Computer Science 2020-07-09 Miika Hannula , Juha Kontinen , Jan Van den Bussche , Jonni Virtema

Predictive coding (PC) is an influential theory of information processing in the brain, providing a biologically plausible alternative to backpropagation. It is motivated in terms of Bayesian inference, as hidden states and parameters are…

Mixed effects regression models are widely used by language researchers. However, these regressions are implemented with an algorithm which may not converge on a solution. While convergence issues in linear mixed effects models can often be…

Applications · Statistics 2018-09-10 Amelia Kimball , Kailen Shantz , Christopher Eager , Joseph Roy

Large language models (LLMs) are increasingly used for conversational clinical decision support, yet they conflate next token prediction with probabilistic decision making. We argue that this conflation reflects an architectural limitation:…

We present a modular semantic account of Bayesian inference algorithms for probabilistic programming languages, as used in data science and machine learning. Sophisticated inference algorithms are often explained in terms of composition of…

Formal reasoning about hashing-based probabilistic data structures often requires reasoning about random variables where when one variable gets larger (such as the number of elements hashed into one bucket), the others tend to be smaller…

Programming Languages · Computer Science 2021-12-01 Jialu Bao , Marco Gaboardi , Justin Hsu , Joseph Tassarotti
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