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Several methods are available for the detection of covarying positions from a multiple sequence alignment (MSA). If the MSA contains a large number of sequences, information about the proximities between residues derived from covariation…

Quantitative Methods · Quantitative Biology 2014-04-29 Greg W. Clark , Sharon H. Ackerman , Elisabeth R. Tillier , Domenico L. Gatti

Biochemistry, ecology, and neuroscience are examples of prominent fields aiming at describing interacting systems that exhibit non-trivial couplings to complex, ever-changing environments. We have recently shown that linear interactions and…

Statistical Mechanics · Physics 2022-08-10 Giorgio Nicoletti , Daniel Maria Busiello

Bayesian neural networks have successfully designed and optimized a robust neural network model in many application problems, including uncertainty quantification. However, with its recent success, information-theoretic understanding about…

Information Theory · Computer Science 2022-06-22 Jae Oh Woo

Estimating mutual correlations between random variables or data streams is essential for intelligent behavior and decision-making. As a fundamental quantity for measuring statistical relationships, mutual information has been extensively…

Information Theory · Computer Science 2024-02-16 Zhengyang Hu , Song Kang , Qunsong Zeng , Kaibin Huang , Yanchao Yang

The framework of Partial Information Decomposition (PID) unveils complex nonlinear interactions in network systems by dissecting the mutual information (MI) between a target variable and several source variables. While PID measures have…

Data Analysis, Statistics and Probability · Physics 2024-09-23 Chiara Barà , Yuri Antonacci , Marta Iovino , Ivan Lazic , Luca Faes

Testing hypothesis of independence between two random elements on a joint alphabet is a fundamental exercise in statistics. Pearson's chi-squared test is an effective test for such a situation when the contingency table is relatively small.…

Statistics Theory · Mathematics 2025-03-19 Jialin Zhang , Zhiyi Zhang

Quantum conditional mutual information (QCMI) is a versatile information theoretic measure. It is used to find the amount of correlations between two qubits from the perspective of a third qubit. In this work we characterise the QCMI of…

Quantum Physics · Physics 2024-01-25 H Saveetha , Peter P. Rohde , R Chandrashekar

Measures of dependence among variables, and measures of information content and shared information have become valuable tools of multi-variable data analysis. Information measures, like marginal entropies, mutual and multi-information, have…

Information Theory · Computer Science 2013-08-02 David J. Galas , Nikita A. Sakhanenko , Benjamin Keller

In data science, it is often required to estimate dependencies between different data sources. These dependencies are typically calculated using Pearson's correlation, distance correlation, and/or mutual information. However, none of these…

Statistics Theory · Mathematics 2015-06-03 Rahul Agarwal , Pierre Sacre , Sridevi V. Sarma

Forecasting techniques for assessing the power of future experiments to discriminate between theories or discover new laws of nature are of great interest in many areas of science. In this paper, we introduce a Bayesian forecasting method…

Data Analysis, Statistics and Probability · Physics 2024-09-24 Mohammad Hossein Namjoo

In statistical physics entropy is usually introduced as a global quantity which expresses the amount of information that would be needed to specify the microscopic configuration of a system. However, for lattice models with infinitely many…

Statistical Mechanics · Physics 2015-06-12 Ulrich Müller , Haye Hinrichsen

Multivariate mutual information provides a conceptual framework for characterizing higher-order interactions in complex systems. Two well-known measures of multivariate information---total correlation and dual total correlation---admit a…

Information Theory · Computer Science 2018-11-28 Kyle Reing , Greg Ver Steeg , Aram Galstyan

The integrated information theory is thought to be a key clue towards the theoretical understanding of consciousness. In this study, we propose a simple numerical model comprising a set of coupled double quantum dots, where the…

Quantum Physics · Physics 2020-09-30 Katsuaki Tanabe

The amount of mutual information contained in time series of two elements gives a measure of how well their activities are coordinated. In a large, complex network of interacting elements, such as a genetic regulatory network within a cell,…

Other Quantitative Biology · Quantitative Biology 2009-11-13 Andre S. Ribeiro , Stuart A. Kauffman , Jason Lloyd-Price , Björn Samuelsson , Joshua E. S. Socolar

Estimating and optimizing Mutual Information (MI) is core to many problems in machine learning; however, bounding MI in high dimensions is challenging. To establish tractable and scalable objectives, recent work has turned to variational…

Machine Learning · Computer Science 2019-05-17 Ben Poole , Sherjil Ozair , Aaron van den Oord , Alexander A. Alemi , George Tucker

The coefficient of variation is a useful indicator for comparing the spread of values between dataset with different units or widely different means. In this paper we address the problem of investigating the equality of the coefficients of…

Methodology · Statistics 2023-06-06 Francesco Bertolino , Silvia Columbu , Mara Manca , Monica Musio

We study the capacity with which a system of independent neuron-like units represents a given set of stimuli. We assume that each neuron provides a fixed amount of information, and that the information provided by different neurons has a…

Disordered Systems and Neural Networks · Physics 2007-05-23 Ines Samengo

A dependence measure for arbitrary type pairs of random variables is proposed and analyzed, which in the particular case where both random variables are continuous turns out to be a concordance measure. Also, a sample version of the…

Statistics Theory · Mathematics 2017-02-07 Arturo Erdely

Measuring mutual information from finite data is difficult. Recent work has considered variational methods maximizing a lower bound. In this paper, we prove that serious statistical limitations are inherent to any method of measuring mutual…

Information Theory · Computer Science 2020-05-21 David McAllester , Karl Stratos

In quantum information theory it is generally accepted that quantum mutual information is an information-theoretic measure of total correlations of a bipartite quantum state. We argue that there exist quantum states for which quantum mutual…

Quantum Physics · Physics 2012-11-16 Zbigniew Walczak
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