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Do autoregressive Transformer language models require explicit positional encodings (PEs)? The answer is 'no' provided they have more than one layer -- they can distinguish sequences with permuted tokens without the need for explicit PEs.…

Machine Learning · Computer Science 2025-06-03 Kazuki Irie

We evaluate the performance of various text embedding models and pipeline configurations for AI-driven search systems. We compare sentence-transformer and generative embedding models (e.g., All-MPNet, BGE, GTE, and Qwen) at different…

Information Retrieval · Computer Science 2025-12-01 Philip Zhong , Kent Chen , Don Wang

This study investigates the impact of morphological typology on tokenization and language modeling performance. We focus on languages with synthetic and analytical morphological structures and examine their productivity when tokenized using…

Computation and Language · Computer Science 2024-11-01 Iñigo Parra

Brain-computer interfaces (BCI) are an important mode of alternative and augmentative communication for many people. Unlike keyboards, many BCI systems do not display even the 26 letters of English at one time, let alone all the symbols in…

Computation and Language · Computer Science 2023-05-09 Shijia Liu , David A. Smith

Positional Encodings (PEs) are used to inject word-order information into transformer-based language models. While they can significantly enhance the quality of sentence representations, their specific contribution to language models is not…

Computation and Language · Computer Science 2023-10-20 Lihu Chen , Gaël Varoquaux , Fabian M. Suchanek

We introduce a new way of learning to encode position information for non-recurrent models, such as Transformer models. Unlike RNN and LSTM, which contain inductive bias by loading the input tokens sequentially, non-recurrent models are…

Machine Learning · Computer Science 2020-03-23 Xuanqing Liu , Hsiang-Fu Yu , Inderjit Dhillon , Cho-Jui Hsieh

We present Supernova, a 650M-parameter decoder-only transformer that demonstrates how careful architectural design and tokenization innovation can achieve the performance of larger models while maintaining computational efficiency. Our…

Computation and Language · Computer Science 2025-07-23 Andrei-Valentin Tanase , Elena Pelican

Following the rationale of end-to-end modeling, CTC, RNN-T or encoder-decoder-attention models for automatic speech recognition (ASR) use graphemes or grapheme-based subword units based on e.g. byte-pair encoding (BPE). The mapping from…

Audio and Speech Processing · Electrical Eng. & Systems 2021-04-16 Mohammad Zeineldeen , Albert Zeyer , Wei Zhou , Thomas Ng , Ralf Schlüter , Hermann Ney

The attention mechanism in a Transformer architecture matches key to query based on both content -- the what -- and position in a sequence -- the where. We present an analysis indicating that what and where are entangled in the popular RoPE…

Machine Learning · Computer Science 2025-12-24 Anand Gopalakrishnan , Robert Csordás , Jürgen Schmidhuber , Michael C. Mozer

Adapting language models to new data distributions by simple finetuning is challenging. This is due to the rigidity of their subword tokenizers, which typically remain unchanged during adaptation. This inflexibility often leads to…

Computation and Language · Computer Science 2026-05-14 Abraham Toluwase Owodunni , Orevaoghene Ahia , Sachin Kumar

Morphologically-rich polysynthetic languages present a challenge for NLP systems due to data sparsity, and a common strategy to handle this issue is to apply subword segmentation. We investigate a wide variety of supervised and unsupervised…

Computation and Language · Computer Science 2022-03-18 Manuel Mager , Arturo Oncevay , Elisabeth Mager , Katharina Kann , Ngoc Thang Vu

Transformer-based models have demonstrated state-of-the-art performance in many intelligent coding tasks such as code comment generation and code completion. Previous studies show that deep learning models are sensitive to the input…

Software Engineering · Computer Science 2025-06-10 Yaoxian Li , Shiyi Qi , Cuiyun Gao , Yun Peng , David Lo , Zenglin Xu , Michael R. Lyu

We present Token-UNet, adopting the TokenLearner and TokenFuser modules to encase Transformers into UNets. While Transformers have enabled global interactions among input elements in medical imaging, current computational challenges hinder…

Computer Vision and Pattern Recognition · Computer Science 2026-02-24 Louis Fabrice Tshimanga , Andrea Zanola , Federico Del Pup , Manfredo Atzori

Relative position encoding (RPE) is important for transformer to capture sequence ordering of input tokens. General efficacy has been proven in natural language processing. However, in computer vision, its efficacy is not well studied and…

Computer Vision and Pattern Recognition · Computer Science 2021-07-30 Kan Wu , Houwen Peng , Minghao Chen , Jianlong Fu , Hongyang Chao

Tokenization is a fundamental step in natural language processing, breaking text into units that computational models can process. While learned subword tokenizers have become the de-facto standard, they present challenges such as large…

Computation and Language · Computer Science 2025-01-22 Pit Neitemeier , Björn Deiseroth , Constantin Eichenberg , Lukas Balles

Length extrapolation has attracted considerable attention recently since it allows transformers to be tested on longer sequences than those used in training. Previous research has shown that this property can be attained by using carefully…

Computation and Language · Computer Science 2023-12-20 Zhen Qin , Yiran Zhong , Hui Deng

Transformer network architecture has proven effective in speech enhancement. However, as its core module, self-attention suffers from quadratic complexity, making it infeasible for training on long speech utterances. In practical scenarios,…

Audio and Speech Processing · Electrical Eng. & Systems 2025-06-10 Qiquan Zhang , Hongxu Zhu , Xinyuan Qian , Eliathamby Ambikairajah , Haizhou Li

Tokenisation is the first step in almost all NLP tasks, and state-of-the-art transformer-based language models all use subword tokenisation algorithms to process input text. Existing algorithms have problems, often producing tokenisations…

Computation and Language · Computer Science 2022-10-25 Edward Gow-Smith , Harish Tayyar Madabushi , Carolina Scarton , Aline Villavicencio

Less than 1% of protein sequences are structurally and functionally annotated. Natural Language Processing (NLP) community has recently embraced self-supervised learning as a powerful approach to learn representations from unlabeled text,…

Biomolecules · Quantitative Biology 2020-12-08 Modestas Filipavicius , Matteo Manica , Joris Cadow , Maria Rodriguez Martinez

Large scale self-supervised pre-training of Transformer language models has advanced the field of Natural Language Processing and shown promise in cross-application to the biological `languages' of proteins and DNA. Learning effective…

Machine Learning · Computer Science 2021-12-15 Meredith V. Trotter , Cuong Q. Nguyen , Stephen Young , Rob T. Woodruff , Kim M. Branson