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Related papers: Language Models as Ontology Encoders

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Taking advantage of the widespread use of ontologies to organise and harmonize knowledge across several distinct domains, this paper proposes a novel approach to improve an embedding-Large Language Model (embedding-LLM) of interest by…

Computation and Language · Computer Science 2024-06-03 Francesco Ronzano , Jay Nanavati

Ontologies are widely used for representing domain knowledge and meta data, playing an increasingly important role in Information Systems, the Semantic Web, Bioinformatics and many other domains. However, logical reasoning that ontologies…

Artificial Intelligence · Computer Science 2025-04-08 Jiaoyan Chen , Olga Mashkova , Fernando Zhapa-Camacho , Robert Hoehndorf , Yuan He , Ian Horrocks

Ontologies provide formal representation of knowledge shared within Semantic Web applications. Ontology learning involves the construction of ontologies from a given corpus. In the past years, ontology learning has traversed through shallow…

Information Retrieval · Computer Science 2024-06-18 Rick Du , Huilong An , Keyu Wang , Weidong Liu

Ontologies are useful for automatic machine processing of domain knowledge as they represent it in a structured format. Yet, constructing ontologies requires substantial manual effort. To automate part of this process, large language models…

Machine Learning · Computer Science 2024-11-01 Andy Lo , Albert Q. Jiang , Wenda Li , Mateja Jamnik

We investigate the task of inserting new concepts extracted from texts into an ontology using language models. We explore an approach with three steps: edge search which is to find a set of candidate locations to insert (i.e., subsumptions…

Computation and Language · Computer Science 2024-03-05 Hang Dong , Jiaoyan Chen , Yuan He , Yongsheng Gao , Ian Horrocks

Generating vector representations (embeddings) of OWL ontologies is a growing task due to its applications in predicting missing facts and knowledge-enhanced learning in fields such as bioinformatics. The underlying semantics of OWL…

Logic in Computer Science · Computer Science 2024-11-07 Fernando Zhapa-Camacho , Robert Hoehndorf

Automating ontology construction and curation is an important but challenging task in knowledge engineering and artificial intelligence. Prediction by machine learning techniques such as contextual semantic embedding is a promising…

Artificial Intelligence · Computer Science 2023-03-21 Jiaoyan Chen , Yuan He , Yuxia Geng , Ernesto Jimenez-Ruiz , Hang Dong , Ian Horrocks

Semantic embedding of knowledge graphs has been widely studied and used for prediction and statistical analysis tasks across various domains such as Natural Language Processing and the Semantic Web. However, less attention has been paid to…

Artificial Intelligence · Computer Science 2021-01-26 Jiaoyan Chen , Pan Hu , Ernesto Jimenez-Ruiz , Ole Magnus Holter , Denvar Antonyrajah , Ian Horrocks

OWL (Web Ontology Language) ontologies, which are able to represent both relational and type facts as standard knowledge graphs and complex domain knowledge in Description Logic (DL) axioms, are widely adopted in domains such as healthcare…

Artificial Intelligence · Computer Science 2025-02-05 Hui Yang , Jiaoyan Chen , Uli Sattler

We tackle the task of enriching ontologies by automatically translating natural language sentences into Description Logic. Since Large Language Models (LLMs) are the best tools for translations, we fine-tuned a GPT-3 model to convert…

Artificial Intelligence · Computer Science 2023-08-01 Patricia Mateiu , Adrian Groza

It has been reliably shown that the similarity of word embeddings obtained from popular neural models such as BERT approximates effectively a form of semantic similarity of the meaning of those words. It is therefore natural to wonder if…

Artificial Intelligence · Computer Science 2024-08-02 Mathieu d'Aquin , Emmanuel Nauer

Ontology alignment (a.k.a ontology matching (OM)) plays a critical role in knowledge integration. Owing to the success of machine learning in many domains, it has been applied in OM. However, the existing methods, which often adopt ad-hoc…

Artificial Intelligence · Computer Science 2022-05-05 Yuan He , Jiaoyan Chen , Denvar Antonyrajah , Ian Horrocks

Ontology embeddings map classes, relations, and individuals in ontologies into $\mathbb{R}^n$, and within $\mathbb{R}^n$ similarity between entities can be computed or new axioms inferred. For ontologies in the Description Logic…

Artificial Intelligence · Computer Science 2024-06-27 Olga Mashkova , Fernando Zhapa-Camacho , Robert Hoehndorf

Large Language Models (LLMs) demonstrate impressive capabilities in natural language processing but suffer from inaccuracies and logical inconsistencies known as hallucinations. This compromises their reliability, especially in domains…

Artificial Intelligence · Computer Science 2025-12-08 Ruslan Idelfonso Magana Vsevolodovna , Marco Monti

Large Language Models (LLMs) have been extensively adopted in Knowledge Graph Completion (KGC), showcasing significant research advancements. However, as black-box models driven by deep neural architectures, current LLM-based KGC methods…

Computation and Language · Computer Science 2025-10-22 Wenbin Guo , Xin Wang , Jiaoyan Chen , Zhao Li , Zirui Chen

This work presents an ontology-integrated large language model (LLM) framework for chemical engineering that unites structured domain knowledge with generative reasoning. The proposed pipeline aligns model training and inference with the…

Machine Learning · Computer Science 2025-12-15 Crystal Su , Kuai Yu , Jingrui Zhang , Mingyuan Shao , Daniel Bauer

Ontology matching (OM) plays an essential role in enabling semantic interoperability and integration across heterogeneous knowledge sources, particularly in the biomedical domain which contains numerous complex concepts related to diseases…

Artificial Intelligence · Computer Science 2026-04-03 Yiping Song , Jiaoyan Chen , Renate A. Schmidt

Ontology, and more broadly, Knowledge Graph Matching is a challenging task in which expressiveness has not been fully addressed. Despite the increasing use of embeddings and language models for this task, approaches for generating…

Computation and Language · Computer Science 2025-02-20 Guilherme Sousa , Rinaldo Lima , Cassia Trojahn

Recently, there has been a growing interest in Multimodal Large Language Models (MLLMs) due to their remarkable potential in various tasks integrating different modalities, such as image and text, as well as applications such as image…

Computer Vision and Pattern Recognition · Computer Science 2024-09-30 Jihen Amara , Birgitta König-Ries , Sheeba Samuel

Fine-grained entity typing (FET), which assigns entities in text with context-sensitive, fine-grained semantic types, is a basic but important task for knowledge extraction from unstructured text. FET has been studied extensively in natural…

Computation and Language · Computer Science 2024-06-12 Tanay Komarlu , Minhao Jiang , Xuan Wang , Jiawei Han
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