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We propose a method for characterizing large complex networks by introducing a new matrix structure, unique for a given network, which encodes structural information; provides useful visualization, even for very large networks; and allows…

Disordered Systems and Neural Networks · Physics 2008-02-28 J. P. Bagrow , E. M. Bollt , J. D. Skufca , D. ben-Avraham

This paper proposes a novel representation of decomposable graphs based on semi-latent tree-dependent bipartite graphs. The novel representation has two main benefits. First, it enables a form of sub-clustering within maximal cliques of the…

Methodology · Statistics 2017-12-05 Mohamad Elmasri

The GraphBLAS high performance library standard has yielded capabilities beyond enabling graph algorithms to be readily expressed in the language of linear algebra. These GraphBLAS capabilities enable new performant ways of thinking about…

Data Structures and Algorithms · Computer Science 2025-09-24 Hayden Jananthan , Jeremy Kepner , Michael Jones , Vijay Gadepally , Michael Houle , Peter Michaleas , Chasen Milner , Alex Pentland

Mining graph data has become a popular research topic in computer science and has been widely studied in both academia and industry given the increasing amount of network data in the recent years. However, the huge amount of network data…

Machine Learning · Computer Science 2020-01-03 Wenwu Zhu , Xin Wang , Peng Cui

Magnetic graphs, originally developed to model quantum systems under magnetic fields, have recently emerged as a powerful framework for analyzing complex directed networks. Existing research has primarily used the spectral properties of the…

Physics and Society · Physics 2025-06-10 Yinan Huang , David F. Gleich , Pan Li

Network theory has proven to be a powerful tool in describing and analyzing systems by modelling the relations between their constituent objects. In recent years great progress has been made by augmenting `traditional' network theory.…

Data Analysis, Statistics and Probability · Physics 2016-06-03 Dominik Traxl , Niklas Boers , Jürgen Kurths

We explore pseudometrics for directed graphs in order to better understand their topological properties. The directed flag complex associated to a directed graph provides a useful bridge between network science and topology. Indeed, it has…

Algebraic Topology · Mathematics 2021-07-26 Ana Lucia Garcia-Pulido , Kathryn Hess , Jane Tan , Katharine Turner , Bei Wang , Naya Yerolemou

Hierarchical data representations in the context of classi cation and data clustering were put forward during the fties. Recently, hierarchical image representations have gained renewed interest for segmentation purposes. In this paper, we…

Discrete Mathematics · Computer Science 2012-09-19 Pierre Soille , Laurent Najman

Persistent homology is constrained to purely topological persistence while multiscale graphs account only for geometric information. This work introduces persistent spectral theory to create a unified low-dimensional multiscale paradigm for…

Combinatorics · Mathematics 2019-12-13 Rui Wang , Duc Duy Nguyen , Guo-Wei Wei

While spectral clustering algorithms for undirected graphs are well established and have been successfully applied to unsupervised machine learning problems ranging from image segmentation and genome sequencing to signal processing and…

Dynamical Systems · Mathematics 2022-11-23 Stefan Klus , Natasa Djurdjevac Conrad

Undirected graphs can be used to describe matrix variate distributions. In this paper, we develop new methods for estimating the graphical structures and underlying parameters, namely, the row and column covariance and inverse covariance…

Machine Learning · Statistics 2014-05-26 Shuheng Zhou

We investigate the generating functions of multi-colored discrete disks with non-homogenous boundary conditions in the context of the Hermitian multi-matrix model where the matrices are coupled in an open chain. We show that the study of…

Mathematical Physics · Physics 2015-06-03 Nicolas Orantin , Alvaro Veliz-Osorio

Many applications collect a large number of time series, for example, the financial data of companies quoted in a stock exchange, the health care data of all patients that visit the emergency room of a hospital, or the temperature sequences…

Information Theory · Computer Science 2017-02-09 Jonathan Mei , José M. F. Moura

Arrangement graphs were introduced for their connection to computational networks and have since generated considerable interest in the literature. In a pair of recent articles by Chen, Ghorbani and Wong, the eigenvalues for the adjacency…

Representation Theory · Mathematics 2017-08-16 José Araujo , Tim Bratten

Graph Convolutional Networks (GCNs) are powerful models for node representation learning tasks. However, the node representation in existing GCN models is usually generated by performing recursive neighborhood aggregation across multiple…

Machine Learning · Computer Science 2021-05-11 Hao Chen , Zengde Deng , Yue Xu , Zhoujun Li

Existing nonnegative matrix factorization methods focus on learning global structure of the data to construct basis and coefficient matrices, which ignores the local structure that commonly exists among data. In this paper, we propose a new…

Machine Learning · Computer Science 2019-07-10 Chong Peng , Zhao Kang , Chenglizhao Chen , Qiang Cheng

Matrix completion models are among the most common formulations of recommender systems. Recent works have showed a boost of performance of these techniques when introducing the pairwise relationships between users/items in the form of…

Machine Learning · Computer Science 2017-04-25 Federico Monti , Michael M. Bronstein , Xavier Bresson

Multiplex networks are complex graph structures in which a set of entities are connected to each other via multiple types of relations, each relation representing a distinct layer. Such graphs are used to investigate many complex…

Real-world networks often exhibit strong transitivity with nontrivial local clustering spectra and degree correlations. Such features are not easily modeled in tractable network models, creating an obstacle to the theoretical understanding…

Physics and Society · Physics 2026-05-26 Lorenzo Cirigliano , Gareth J. Baxter , Gábor Timár

Parametric resampling schemes have been recently introduced in complex network analysis with the aim of assessing the statistical significance of graph clustering and the robustness of community partitions. We propose here a method to…

Physics and Society · Physics 2014-02-25 Fabrizio De Vico Fallani , Vincenzo Nicosia , Vito Latora , Mario Chavez
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