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One of the key challenges in many research fields is uncovering how different interconnected systems interact within complex networks, typically represented as multi-layer networks. Capturing the intra- and cross-layer interactions among…

Signal Processing · Electrical Eng. & Systems 2025-10-13 Stefania Sardellitti , Breno C. Bispo , Fernando A. N. Santos , Juliano B. Lima

Network theory provides a principled abstraction of the human brain: reducing a complex system into a simpler representation from which to investigate brain organisation. Recent advancement in the neuroimaging field are towards representing…

Neurons and Cognition · Quantitative Biology 2016-03-23 A. W. Chung , M. D. Schirmer , M. L. Krishna , G. Ball , P. Aljabar , A. D. Edwards , G. Montana

Topological deep learning is a rapidly growing field that pertains to the development of deep learning models for data supported on topological domains such as simplicial complexes, cell complexes, and hypergraphs, which generalize many…

In this paper, we introduce heat kernel coupling (HKC) as a method of constructing multimodal spectral geometry on weighted graphs of different size without vertex-wise bijective correspondence. We show that Laplacian averaging can be…

Computer Vision and Pattern Recognition · Computer Science 2013-12-12 Michael M. Bronstein , Klaus Glashoff

Networks constitute fundamental organizational structures across biological systems, although conventional graph-theoretic analyses capture exclusively pairwise interactions, thereby omitting the intricate higher-order relationships that…

Quantitative Methods · Quantitative Biology 2025-12-23 Sixtus Dakurah

Topological Neural Networks (TNNs) incorporate higher-order relational information beyond pairwise interactions, enabling richer representations than Graph Neural Networks (GNNs). Concurrently, topological descriptors based on persistent…

Machine Learning · Computer Science 2024-06-06 Yogesh Verma , Amauri H Souza , Vikas Garg

Topological Deep Learning seeks to enhance the predictive performance of neural network models by harnessing topological structures in input data. Topological neural networks operate on spaces such as cell complexes and hypergraphs, that…

In-memory computing is an emerging computing paradigm that could enable deeplearning inference at significantly higher energy efficiency and reduced latency. The essential idea is to map the synaptic weights corresponding to each layer to…

Machine Learning · Computer Science 2019-06-11 Martino Dazzi , Abu Sebastian , Pier Andrea Francese , Thomas Parnell , Luca Benini , Evangelos Eleftheriou

Graph generative modelling has become an essential task due to the wide range of applications in chemistry, biology, social networks, and knowledge representation. In this work, we propose a novel framework for generating graphs by adapting…

Machine Learning · Statistics 2026-02-04 Anthony Stephenson , Ian Gallagher , Christopher Nemeth

Graph kernels are kernel methods measuring graph similarity and serve as a standard tool for graph classification. However, the use of kernel methods for node classification, which is a related problem to graph representation learning, is…

Machine Learning · Computer Science 2019-10-08 Yu Tian , Long Zhao , Xi Peng , Dimitris N. Metaxas

We study a new paradigm of knowledge transfer that aims at encoding graph topological information into graph neural networks (GNNs) by distilling knowledge from a teacher GNN model trained on a complete graph to a student GNN model…

Machine Learning · Computer Science 2023-01-18 Chenxiao Yang , Qitian Wu , Junchi Yan

Deep learning methods have demonstrated outstanding performances on classification and regression tasks on homogeneous data types (e.g., image, audio, and text data). However, tabular data still pose a challenge, with classic machine…

Machine Learning · Computer Science 2023-11-15 Antonio Briola , Yuanrong Wang , Silvia Bartolucci , Tomaso Aste

Bayesian Optimization (BO) has the potential to solve various combinatorial tasks, ranging from materials science to neural architecture search. However, BO requires specialized kernels to effectively model combinatorial domains. Recent…

Machine Learning · Computer Science 2025-10-31 Colin Doumont , Victor Picheny , Viacheslav Borovitskiy , Henry Moss

Topological data analysis is an emerging mathematical concept for characterizing shapes in multi-scale data. In this field, persistence diagrams are widely used as a descriptor of the input data, and can distinguish robust and noisy…

Machine Learning · Statistics 2017-06-13 Genki Kusano , Kenji Fukumizu , Yasuaki Hiraoka

Recent advances in molecular representation learning have produced highly effective encodings of molecules for numerous cheminformatics and bioinformatics tasks. However, extracting general chemical insight while balancing predictive…

Machine Learning · Computer Science 2025-09-26 Rahul Khorana

Tree kernels have demonstrated their ability to deal with hierarchical data, as the intrinsic tree structure often plays a discriminative role. While such kernels have been successfully applied to various domains such as nature language…

Computer Vision and Pattern Recognition · Computer Science 2016-04-08 Yanwei Cui , Laetitia Chapel , Sébastien Lefèvre

The standard cosmological model with cold dark matter posits a hierarchical formation of structures. We introduce topological neural networks (TNNs), implemented as message-passing neural networks on higher-order structures, to effectively…

Cosmology and Nongalactic Astrophysics · Physics 2025-08-06 Jun-Young Lee , Francisco Villaescusa-Navarro

Persistent topological Laplacians constitute a new class of tools in topological data analysis (TDA). They are motivated by the necessity to address challenges encountered in persistent homology when handling complex data. These Laplacians…

Algebraic Topology · Mathematics 2024-12-12 Xiaoqi Wei , Guo-Wei Wei

Prediction and discovery of new materials with desired properties are at the forefront of quantum science and technology research. A major bottleneck in this field is the computational resources and time complexity related to finding new…

This paper introduces a novel graph signal processing framework for building graph-based models from classes of filtered signals. In our framework, graph-based modeling is formulated as a graph system identification problem, where the goal…

Machine Learning · Computer Science 2018-03-08 Hilmi E. Egilmez , Eduardo Pavez , Antonio Ortega
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