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A punctuated equilibrium model of biological evolution with relative fitness between different species being the fundamental driving force of evolution is introduced. Mutation is modeled as a fitness updating cellular automaton process…

Condensed Matter · Physics 2015-06-25 H. F. Chau , L. Mak , P. K. Kwok

Autonomous vehicles are slowly becoming reality thanks to the efforts of many academic and industrial organizations. Due to the complexity of the software powering these systems and the dynamicity of the development processes, an…

Software Engineering · Computer Science 2017-11-27 Federico Giaimo , Christian Berger , Crispin Kirchner

We say that a Cellular Automata (CA) is coalescing when its execution on two distinct (random) initial configurations in the same asynchronous mode (the same cells are updated in each configuration at each time step) makes both…

Cellular Automata and Lattice Gases · Physics 2007-05-23 Jean-Baptiste Rouquier , Michel Morvan

The transport and chemical reactions of solutes are modelled as a cellular automaton in which molecules of different species perform a random walk on a regular lattice and react according to a local probabilistic rule. The model describes…

comp-gas · Physics 2009-10-22 T. Karapiperis , B. Blankleider

A new kind of cellular automaton (CA) for the study of the dynamics of urban systems is proposed. The state of a cell is not described using a finite set, but by means of continuum variables. A population sector is included, taking into…

Cellular Automata and Lattice Gases · Physics 2007-05-23 Alberto Vancheri , Paolo Giordano , Denise Andrey , Sergio Albeverio

We outline the methodology of simulating common envelope evolution (CEE) with the moving-mesh code MANGA. We extend MANGA to include multiple time-steps. This provides substantial speedups for problems with large dynamic range. We describe…

Solar and Stellar Astrophysics · Physics 2019-05-15 Logan J. Prust , Philip Chang

Generalizing the motion representation we introduced for number-conserving rules, we give a systematic way to construct a generalized motion representation valid for non-conservative rules using the expression of the current, which appears…

Cellular Automata and Lattice Gases · Physics 2015-06-26 Nino Boccara , Henryk Fuks

Cellular automata (CA) are a class of computational models that exhibit rich dynamics emerging from the local interaction of cells arranged in a regular lattice. In this work we focus on a generalised version of typical CA, called graph…

Machine Learning · Computer Science 2021-10-28 Daniele Grattarola , Lorenzo Livi , Cesare Alippi

We say that a Cellular Automata (CA) is coalescing when its execution on two distinct (random) initial configurations in the same asynchronous mode (the same cells are updated in each configuration at each time step) makes both…

Cellular Automata and Lattice Gases · Physics 2007-12-13 Jean-Baptiste Rouquier , Michel Morvan

We recently highlighted a fundamental problem recognized to confound algorithmic optimization, namely, \textit{conflating} the objective with the objective function. Even when the former is well defined, the latter may not be obvious, e.g.,…

Neural and Evolutionary Computing · Computer Science 2022-06-28 Moshe Sipper , Jason H. Moore , Ryan J. Urbanowicz

We introduce the Discrete Inverse Continuity Equation (DICE) method, a generative modeling approach that learns the evolution of a stochastic process from given sample populations at a finite number of time points. Models learned with DICE…

Machine Learning · Computer Science 2025-07-08 Tobias Blickhan , Jules Berman , Andrew Stuart , Benjamin Peherstorfer

A number-conserving cellular automaton is a cellular automaton whose states are integers and whose transition function keeps the sum of all cells constant throughout its evolution. It can be seen as a kind of modelization of the physical…

Discrete Mathematics · Computer Science 2008-09-03 Katsunobu Imai , Bruno Martin

Neural Cellular Automata (NCA) represent a powerful framework for modeling biological self-organization, extending classical rule-based systems with trainable, differentiable (or evolvable) update rules that capture the adaptive…

Artificial Intelligence · Computer Science 2025-09-16 Benedikt Hartl , Michael Levin , Léo Pio-Lopez

This paper shows how to determine all the unidimensional two-state cellular automaton rules of a given number of inputs which conserve the number of active sites. These rules have to satisfy a necessary and sufficient condition. If the…

adap-org · Physics 2009-10-30 Nino Boccara , Henryk Fuks

We show that there exists a one-to-one correspondence between the set of number-conserving cellular automata (CA) with $q$ inputs and the set of balanced sequences with $q$ terms. This allows to enumerate number-conserving CA. We also show…

Cellular Automata and Lattice Gases · Physics 2007-11-09 Henryk Fuks , Kate Sullivan

Theoretical analyses of evolution strategies are indispensable for gaining a deep understanding of their inner workings. For constrained problems, rather simple problems are of interest in the current research. This work presents a…

Neural and Evolutionary Computing · Computer Science 2019-08-12 Patrick Spettel , Hans-Georg Beyer

Modeling single-cell gene expression across diverse biological and technical conditions is crucial for characterizing cellular states and simulating unseen scenarios. Existing methods often treat genes as independent tokens, overlooking…

Artificial Intelligence · Computer Science 2026-04-21 Jiahao Li , Jiayi Dong , Peng Ye , Xiaochi Zhou , Haohai Lu , Fei Wang

Finding the optimal parameter setting (i.e. the optimal population size, the optimal mutation probability, the optimal evolutionary model etc) for an Evolutionary Algorithm (EA) is a difficult task. Instead of evolving only the parameters…

Neural and Evolutionary Computing · Computer Science 2021-09-29 Mihai Oltean , Crina Groşan

Microbiological systems evolve to fulfill their tasks with maximal efficiency. The immune system is a remarkable example, where self-non self distinction is accomplished by means of molecular interaction between self proteins and antigens,…

Cell Behavior · Quantitative Biology 2013-08-26 Marcio Argollo de Menezes , Edgardo Brigatti , Veit Schwämmle

We have recently presented SAFE -- Solution And Fitness Evolution -- a commensalistic coevolutionary algorithm that maintains two coevolving populations: a population of candidate solutions and a population of candidate objective functions.…

Neural and Evolutionary Computing · Computer Science 2022-06-29 Moshe Sipper , Jason H. Moore , Ryan J. Urbanowicz