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In this paper we investigate the use of staged tree models for discrete longitudinal data. Staged trees are a type of probabilistic graphical model for finite sample space processes. They are a natural fit for longitudinal data because a…

Methodology · Statistics 2024-01-10 Jack Storror Carter , Manuele Leonelli , Eva Riccomagno , Alessandro Ugolini

Biological active matter is typically tightly coupled to chemical reaction networks affecting its assembly-disassembly dynamics and stress generation. We show that localized states can emerge spontaneously if assembly of active matter is…

Biological Physics · Physics 2023-12-15 Luca Barberi , Karsten Kruse

In this paper, we provide an overview of the research conducted in the context of structural systems since the latest survey by Dion et al. in 2003. We systematically consider all the papers that cite this survey as well as the seminal work…

Optimization and Control · Mathematics 2020-08-27 Guilherme Ramos , A. Pedro Aguiar , Sergio Pequito

Frick and Grohe [J. ACM 48 (2006), 1184-1206] introduced a notion of graph classes with locally bounded tree-width and established that every first order logic property can be decided in almost linear time in such a graph class. Here, we…

Data Structures and Algorithms · Computer Science 2011-08-30 Tomas Gavenciak , Daniel Kral , Sang-il Oum

The behaviour of many real-world phenomena can be modelled by nonlinear dynamical systems whereby a latent system state is observed through a filter. We are interested in interacting subsystems of this form, which we model by a set of…

Machine Learning · Computer Science 2017-02-20 Oliver M. Cliff , Mikhail Prokopenko , Robert Fitch

Besides the complexity in time or in number of messages, a common approach for analyzing distributed algorithms is to look at the assumptions they make on the underlying network. We investigate this question from the perspective of network…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-05-02 Arnaud Casteigts , Serge Chaumette , Afonso Ferreira

A salient feature of topological phases are surface states and many of the widely studied physical properties are directly tied to their existence. Although less explored, a variety of topological phases can however similarly be…

Mesoscale and Nanoscale Physics · Physics 2021-08-11 Toshikaze Kariyado , Robert-Jan Slager

Nanoparticles with "sticky patches" have long been proposed as building blocks for the self-assembly of complex structures. The synthetic realizability of such patchy particles, however, greatly lags behind predictions of patterns they…

Soft Condensed Matter · Physics 2013-10-03 Michael Grünwald , Phillip L. Geissler

We introduce the concept of a class of graphs, or more generally, relational structures, being locally tree-decomposable. There are numerous examples of locally tree-decomposable classes, among them the class of planar graphs and all…

Data Structures and Algorithms · Computer Science 2007-05-23 Markus Frick , Martin Grohe

Continuous first-order logic is used to apply model-theoretic analysis to analytic structures (e.g. Hilbert spaces, Banach spaces, probability spaces, etc.). Classical computable model theory is used to examine the algorithmic structure of…

Logic · Mathematics 2008-06-04 Wesley Calvert

We investigate the presence of localized solutions in models described by a single real scalar field with generalized dynamics. The study offers a method to solve very intricate nonlinear ordinary differential equations, and we illustrate…

High Energy Physics - Theory · Physics 2014-03-17 D. Bazeia , L. Losano , R. Menezes

We propose a new method for quantitative characterization of spatial network-like patterns with loops, such as surface fracture patterns, leaf vein networks and patterns of urban streets. Such patterns are not well characterized by purely…

Pattern Formation and Solitons · Physics 2015-05-20 Andrea Perna , Pascale Kuntz , Stéphane Douady

We provide a rigorous solution to the problem of constructing a structural evolution for a network of coupled identical dynamical units that switches between specified topologies without constraints on their structure. The evolution of the…

Physics and Society · Physics 2016-01-20 Charo I. del Genio , Miguel Romance , Regino Criado , Stefano Boccaletti

A large family of deployable filamentary structures can be built by connecting two elastic rods along their length. The resulting structure has interesting shapes that can be stabilized by tuning the material properties of each rod. To…

Classical Analysis and ODEs · Mathematics 2016-04-26 Thomas Lessinnes , Alain Goriely

It has recently been observed that, in contrast to the classical case, holomorphic structures on line bundles over the quantum projective line are not uniquely determined by degree. We formulate a fixed-point-theoretic framework for the…

Quantum Algebra · Mathematics 2026-03-27 Indranil Biswas , Satyajit Guin , Pradip Kumar

We develop tools for analyzing focused stochastic local search algorithms. These are algorithms which search a state space probabilistically by repeatedly selecting a constraint that is violated in the current state and moving to a random…

Discrete Mathematics · Computer Science 2015-08-18 Dimitris Achlioptas , Fotis Iliopoulos

We analyze pattern formation on a network of cells where each cell inhibits its neighbors through cell-to-cell contact signaling. The network is modeled as an interconnection of identical dynamical subsystems each of which represents the…

Dynamical Systems · Mathematics 2014-07-25 Ana S. Rufino Ferreira , Murat Arcak

Topological methods have the potential of exploring data clouds without making assumptions on their the structure. Here we propose a hierarchical topological clustering algorithm that can be implemented with any distance choice. The…

Machine Learning · Computer Science 2026-02-10 Ana Carpio , Gema Duro

We prove the existence of time-periodic solutions consisting of patterns built up from two states, one with small amplitude and the other one with large amplitude, in general nonlinear Hamiltonian finite-size lattices with global coupling.…

Pattern Formation and Solitons · Physics 2015-06-26 Dirk Hennig

We consider a branching random walk on the lattice, where the branching rates are given by an i.i.d. Pareto random potential. We show a very strong form of intermittency, where with high probability most of the mass of the system is…

Probability · Mathematics 2016-05-02 Marcel Ortgiese , Matthew I. Roberts