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In the Graph Reconstruction (GR) problem, the goal is to recover a hidden graph by utilizing some oracle that provides limited access to the structure of the graph. The interest is in characterizing how strong different oracles are when the…

Data Structures and Algorithms · Computer Science 2025-09-15 Juha Harviainen , Pekka Parviainen

In this paper we consider the problem of computing an mRNA sequence of maximal similarity for a given mRNA of secondary structure constraints, introduced by Backofen et al. in [BNS02] denoted as the MRSO problem. The problem is known to be…

Data Structures and Algorithms · Computer Science 2007-05-23 Frank Gurski

An ordered hypergraph is a hypergraph whose vertex set is linearly ordered, and a convex geometric hypergraph is a hypergraph whose vertex set is cyclically ordered. Extremal problems for ordered and convex geometric graphs have a rich…

Combinatorics · Mathematics 2019-06-12 Zoltán F\" uredi , Tao Jiang , Alexandr Kostochka , Dhruv Mubayi , Jacques Verstraëte

In the List $k$-Coloring problem we are given a graph whose every vertex is equipped with a list, which is a subset of $\{1,\ldots,k\}$. We need to decide if $G$ admits a proper coloring, where every vertex receives a color from its list.…

Combinatorics · Mathematics 2025-09-29 Marta Piecyk , Paweł Rzążewski

We consider the distributed message-passing {LOCAL} model. In this model a communication network is represented by a graph where vertices host processors, and communication is performed over the edges. Computation proceeds in synchronous…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-05-01 Leonid Barenboim

The problem of enumerating connected subgraphs of a given size in a graph has been extensively studied in recent years. In this paper, we propose an algorithm with a delay of $O(k\Delta)$ for enumerating all connected induced subgraphs of…

Data Structures and Algorithms · Computer Science 2025-07-09 Chenglong Xiao , Chengyong Mao , Shanshan Wang

The success of Large Language Models (LLMs) in various domains has led researchers to apply them to graph-related problems by converting graph data into natural language text. However, unlike graph data, natural language inherently has…

Machine Learning · Computer Science 2025-02-13 Xu Chu , Hanlin Xue , Zhijie Tan , Bingce Wang , Tong Mo , Weiping Li

We unify several seemingly different graph and digraph classes under one umbrella. These classes are all broadly speaking different generalizations of interval graphs, and include, in addition to interval graphs, also adjusted interval…

Discrete Mathematics · Computer Science 2018-06-28 Pavol Hell , Jing Huang , Ross M. McConnell , Arash Rafiey

In the area of beyond-planar graphs, i.e. graphs that can be drawn with some local restrictions on the edge crossings, the recognition problem is prominent next to the density question for the different graph classes. For 1-planar graphs,…

Data Structures and Algorithms · Computer Science 2021-08-04 Henry Förster , Michael Kaufmann , Chrysanthi N. Raftopoulou

In this report, we consider maximal solutions to the induced bounded-degree subgraph problem and relate it to issues concerning stream control in multiple-input multiple-output (MIMO) networks. We present a new distributed algorithm that…

Networking and Internet Architecture · Computer Science 2007-09-10 Harish Sethu

This thesis focuses on theoretical and algorithmic tools for determining the numbers of induced subgraphs in strongly regular graphs, SRGs, and on further applications of such numbers. We consider in more detail a restricted class of these…

Combinatorics · Mathematics 2018-12-14 Kristína Kováčiková

In this paper, we define and study the new problem Simultaneous PQ-Ordering. Its input consists of a set of PQ-trees, which represent sets of circular orders of their leaves, together with a set of child-parent relations between these…

Data Structures and Algorithms · Computer Science 2011-12-02 Thomas Bläsius , Ignaz Rutter

The problem of counting occurrences of query graphs in a large data graph, known as subgraph counting, is fundamental to several domains such as genomics and social network analysis. Many important special cases (e.g. triangle counting)…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-04-05 Venkatesan T. Chakaravarthy , Michael Kapralov , Prakash Murali , Fabrizio Petrini , Xinyu Que , Yogish Sabharwal , Baruch Schieber

Problems related to finding induced subgraphs satisfying given properties form one of the most studied areas within graph algorithms. Such problems have given rise to breakthrough results and led to development of new techniques both within…

Data Structures and Algorithms · Computer Science 2017-10-31 Petr A. Golovach , Pinar Heggernes , Paloma Lima , Pedro Montealegre

We give the first polynomial-time algorithms on graphs of bounded maximum induced matching width (mim-width) for problems that are not locally checkable. In particular, we give $n^{\mathcal{O}(w)}$-time algorithms on graphs of mim-width at…

Data Structures and Algorithms · Computer Science 2017-09-29 Lars Jaffke , O-joung Kwon , Jan Arne Telle

The Subtree Isomorphism problem asks whether a given tree is contained in another given tree. The problem is of fundamental importance and has been studied since the 1960s. For some variants, e.g., ordered trees, near-linear time algorithms…

Computational Complexity · Computer Science 2015-10-16 Amir Abboud , Arturs Backurs , Thomas Dueholm Hansen , Virginia Vassilevska Williams , Or Zamir

We consider the following problem for oriented graphs and digraphs: Given an oriented graph (digraph) $G$, does it contain an induced subdivision of a prescribed digraph $D$? The complexity of this problem depends on $D$ and on whether $G$…

Discrete Mathematics · Computer Science 2016-03-27 Jørgen Bang-Jensen , Frédéric Havet , Nicolas Trotignon

A recent breakthrough of Behnezhad and Ghafari [FOCS 2024] and subsequent work of Assadi, Khanna, and Kiss [SODA 2025] gave algorithms for the fully dynamic $(1-\varepsilon)$-approximate maximum matching problem whose runtimes are…

Data Structures and Algorithms · Computer Science 2025-02-05 Kevin Pratt

The class of quasi-chain graphs is an extension of the well-studied class of chain graphs. This latter class enjoys many nice and important properties, such as bounded clique-width, implicit representation, well-quasi-ordering by induced…

Combinatorics · Mathematics 2021-04-12 Bogdan Alecu , Aistis Atminas , Vadim Lozin , Dmitriy Malyshev

In the recent research of data mining, frequent structures in a sequence of graphs have been studied intensively, and one of the main concern is changing structures along a sequence of graphs that can capture dynamic properties of data. On…

Data Structures and Algorithms · Computer Science 2012-06-28 Takeaki Uno , Yushi Uno
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