Related papers: Soft Graph Clustering for single-cell RNA Sequenci…
Graph Neural Networks (GNNs) excel in delineating graph structures in diverse domains, including community analysis and recommendation systems. As the interpretation of GNNs becomes increasingly important, the demand for robust baselines…
Graph clustering is a fundamental task in graph analysis, and recent advances in utilizing graph neural networks (GNNs) have shown impressive results. Despite the success of existing GNN-based graph clustering methods, they often overlook…
Graph Convolutional Networks (GCNs) achieve an impressive performance due to the remarkable representation ability in learning the graph information. However, GCNs, when implemented on a deep network, require expensive computation power,…
We study graph data augmentation by mixup, which has been used successfully on images. A key operation of mixup is to compute a convex combination of a pair of inputs. This operation is straightforward for grid-like data, such as images,…
Sequence classification has a wide range of real-world applications in different domains, such as genome classification in health and anomaly detection in business. However, the lack of explicit features in sequence data makes it difficult…
Many methods have been proposed for removing batch effects and aligning single-cell RNA (scRNA) datasets. However, performance is typically evaluated based on multiple parameters and few datasets, creating challenges in assessing which…
Electrocardiography (ECG) signals can be considered as multi-variable time-series. The state-of-the-art ECG data classification approaches, based on either feature engineering or deep learning techniques, treat separately spectral and time…
In this paper, we propose a novel framework, the Sampling-guided Heterogeneous Graph Neural Network (SHT-GNN), to effectively tackle the challenge of missing data imputation in longitudinal studies. Unlike traditional methods, which often…
To read the final version please go to IEEE TGRS on IEEE Xplore. Convolutional neural networks (CNNs) have been attracting increasing attention in hyperspectral (HS) image classification, owing to their ability to capture spatial-spectral…
Recent years have witnessed the emerging success of graph neural networks (GNNs) for modeling structured data. However, most GNNs are designed for homogeneous graphs, in which all nodes and edges belong to the same types, making them…
Clustering nodes in heterophilous graphs is challenging as traditional methods assume that effective clustering is characterized by high intra-cluster and low inter-cluster connectivity. To address this, we introduce HeNCler-a novel…
Temporal graph clustering is a complex task that involves discovering meaningful structures in dynamic graphs where relationships and entities change over time. Existing methods typically require centralized data collection, which poses…
Graph neural networks (GNNs) have achieved remarkable success in node classification. Building on this progress, heterogeneous graph neural networks (HGNNs) integrate relation types and node and edge semantics to leverage heterogeneous…
Single-cell RNA sequencing allows the quantification of gene expression at the individual cell level, enabling the study of cellular heterogeneity and gene expression dynamics. Dimensionality reduction is a common preprocessing step…
Node classification has gained significant importance in graph deep learning with real-world applications such as recommendation systems, drug discovery, and citation networks. Graph Convolutional Networks and Graph Transformers have…
Graph Neural Networks (GNNs) are powerful machine learning models that excel at analyzing structured data represented as graphs, demonstrating remarkable performance in applications like social network analysis and recommendation systems.…
In this article, we propose a sparse spectra graph convolutional network (SSGCNet) for solving Epileptic EEG signal classification problems. The aim is to achieve a lightweight deep learning model without losing model classification…
Over-smoothing in Graph Neural Networks (GNNs) causes collapse in distinct node features, particularly on heterophilic graphs where adjacent nodes often have dissimilar labels. Although sheaf neural networks partially mitigate this problem,…
Research on Graph Structure Learning (GSL) provides key insights for graph-based clustering, yet current methods like Graph Neural Networks (GNNs), Graph Attention Networks (GATs), and contrastive learning often rely heavily on the original…
Graph Convolutional Network (GCN) is a model that can effectively handle graph data tasks and has been successfully applied. However, for large-scale graph datasets, GCN still faces the challenge of high computational overhead, especially…