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Related papers: Signed Graph Learning: Algorithms and Theory

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We present LaplaceGNN, a novel self-supervised graph learning framework that bypasses the need for negative sampling by leveraging spectral bootstrapping techniques. Our method integrates Laplacian-based signals into the learning process,…

Machine Learning · Computer Science 2025-06-26 Lorenzo Bini , Stephane Marchand-Maillet

Accurately reconstructing Gene Regulatory Networks (GRNs) is crucial for understanding gene functions and disease mechanisms. Single-cell RNA sequencing (scRNA-seq) technology provides vast data for computational GRN reconstruction. Since…

Molecular Networks · Quantitative Biology 2025-12-16 Rijie Xi , Weikang Xu , Wei Xiong , Yuannong Ye , Bin Zhao

Machine learning frameworks such as graph neural networks typically rely on a given, fixed graph to exploit relational inductive biases and thus effectively learn from network data. However, when said graphs are (partially) unobserved,…

Machine Learning · Computer Science 2022-05-20 Max Wasserman , Saurabh Sihag , Gonzalo Mateos , Alejandro Ribeiro

Graph neural networks (GNNs) have achieved great success in many scenarios with graph-structured data. However, in many real applications, there are three issues when applying GNNs: graphs are unknown, nodes have noisy features, and graphs…

Machine Learning · Computer Science 2022-10-11 Yixiang Shan , Jielong Yang , Xing Liu , Yixing Gao , Hechang Chen , Shuzhi Sam Ge

Computer-aided breast cancer diagnosis in mammography is limited by inadequate data and the similarity between benign and cancerous masses. To address this, we propose a signed graph regularized deep neural network with adversarial…

Image and Video Processing · Electrical Eng. & Systems 2019-09-17 Heyi Li , Dongdong Chen , William H. Nailon , Mike E. Davies , David I. Laurenson

We introduce the concept of a $k$-token signed graph and study some of its combinatorial and algebraic properties. We prove that two switching isomorphic signed graphs have switching isomorphic token graphs. Moreover, we show that the…

Combinatorics · Mathematics 2024-03-06 C. Dalfó , M. A. Fiol , E. Steffen

Graph learning aims to infer a network structure directly from observed data, enabling the analysis of complex dependencies in irregular domains. Traditional methods focus on scalar signals at each node, ignoring dependencies along…

Signal Processing · Electrical Eng. & Systems 2026-05-08 Andrei Buciulea , Bishwadeep Das , Elvin Isufi , Antonio G. Marques

The prevalence of graph-based data has spurred the rapid development of graph neural networks (GNNs) and related machine learning algorithms. Yet, despite the many datasets naturally modeled as directed graphs, including citation, website,…

Machine Learning · Computer Science 2021-06-14 Xitong Zhang , Yixuan He , Nathan Brugnone , Michael Perlmutter , Matthew Hirn

Computational efficiency is a major bottleneck in using classic graph-based approaches for semi-supervised learning on datasets with a large number of unlabeled examples. Known techniques to improve efficiency typically involve an…

Machine Learning · Computer Science 2023-06-13 Dravyansh Sharma , Maxwell Jones

Signed graphs encode positive (attractive) and negative (repulsive) relations between nodes. We extend spectral clustering to signed graphs via the one-parameter family of Signed Power Mean Laplacians, defined as the matrix power mean of…

Machine Learning · Computer Science 2019-05-16 Pedro Mercado , Francesco Tudisco , Matthias Hein

Graph rigidity theory studies the capability of a graph embedded in the Euclidean space to constrain its global geometric shape via local constraints among nodes and edges, and has been widely exploited in network localization and formation…

Optimization and Control · Mathematics 2025-06-05 Jinpeng Huang , Gangshan Jing

Comparison among graphs is ubiquitous in graph analytics. However, it is a hard task in terms of the expressiveness of the employed similarity measure and the efficiency of its computation. Ideally, graph comparison should be invariant to…

Social and Information Networks · Computer Science 2018-05-30 Anton Tsitsulin , Davide Mottin , Panagiotis Karras , Alex Bronstein , Emmanuel Müller

Protein function prediction is the important problem in modern biology. In this paper, the un-normalized, symmetric normalized, and random walk graph Laplacian based semi-supervised learning methods will be applied to the integrated network…

Machine Learning · Computer Science 2013-07-12 Loc Tran

Networks with a prescribed power-law scaling in the spectrum of the graph Laplacian can be generated by evolutionary optimization. The Laplacian spectrum encodes the dynamical behavior of many important processes. Here, the networks are…

Physics and Society · Physics 2015-08-28 Steffen Karalus , Joachim Krug

Graph Signal Processing (GSP) provides a powerful framework for analysing complex, interconnected systems by modelling data as signals on graphs. While recent advances have enabled graph topology learning from observed signals, existing…

Signal Processing · Electrical Eng. & Systems 2025-08-08 Alexander Jenkins , Thiernithi Variddhisai , Ahmed El-Medany , Fu Siong Ng , Danilo Mandic

The theory of sampling and recovery of bandlimited graph signals has been extensively studied. However, in many cases, the observation of a signal is quite coarse. For example, users only provide simple comments such as "like" or "dislike"…

Signal Processing · Electrical Eng. & Systems 2024-02-20 Wenwei Liu , Hui Feng , Feng Ji , Bo Hu

Learning a suitable graph is an important precursor to many graph signal processing (GSP) pipelines, such as graph spectral signal compression and denoising. Previous graph learning algorithms either i) make some assumptions on connectivity…

Signal Processing · Electrical Eng. & Systems 2021-02-19 Saghar Bagheri , Gene Cheung , Antonio Ortega , Fen Wang

We propose a kernel regression method to predict a target signal lying over a graph when an input observation is given. The input and the output could be two different physical quantities. In particular, the input may not be a graph signal…

Information Theory · Computer Science 2019-08-02 Arun Venkitaraman , Saikat Chatterjee , Peter Händel

Graph neural networks have shown superior performance in a wide range of applications providing a powerful representation of graph-structured data. Recent works show that the representation can be further improved by auxiliary tasks.…

Machine Learning · Computer Science 2021-02-09 Dasol Hwang , Jinyoung Park , Sunyoung Kwon , Kyung-Min Kim , Jung-Woo Ha , Hyunwoo J. Kim

We address the problem of inferring an undirected graph from nodal observations, which are modeled as non-stationary graph signals generated by local diffusion dynamics that depend on the structure of the unknown network. Using the…

Signal Processing · Electrical Eng. & Systems 2019-02-01 Rasoul Shafipour , Santiago Segarra , Antonio G. Marques , Gonzalo Mateos