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Foundation models (FMs) have demonstrated strong transferability across medical imaging tasks, yet their clinical utility depends critically on how pretrained representations are adapted to domain-specific data, supervision regimes, and…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Karma Phuntsho , Abdullah , Kyungmi Lee , Ickjai Lee , Euijoon Ahn

Wildlife monitoring is crucial for studying biodiversity loss and climate change. Camera trap images provide a non-intrusive method for analyzing animal populations and identifying ecological patterns over time. However, manual analysis is…

Computer Vision and Pattern Recognition · Computer Science 2026-01-06 Julian D. Santamaria , Claudia Isaza , Jhony H. Giraldo

Biological phenotypes are products of complex evolutionary processes in which selective forces influence multiple biological trait measurements in unknown ways. Phylogenetic factor analysis disentangles these relationships across the…

Species distribution models (SDMs), which aim to predict species occurrence based on environmental variables, are widely used to monitor and respond to biodiversity change. Recent deep learning advances for SDMs have been shown to perform…

Machine Learning · Computer Science 2025-11-14 Catherine Villeneuve , Benjamin Akera , Mélisande Teng , David Rolnick

Passive acoustic monitoring has become a key strategy in biodiversity assessment, conservation, and behavioral ecology, especially as Internet-of-Things (IoT) devices enable continuous in situ audio collection at scale. While recent…

Audio and Speech Processing · Electrical Eng. & Systems 2026-02-11 Heitor R. Guimarães , Abhishek Tiwari , Mahsa Abdollahi , Anderson R. Avila , Tiago H. Falk

Artificial intelligence (AI) has significantly advanced Earth sciences, yet its full potential in to comprehensively modeling Earth's complex dynamics remains unrealized. Geoscience foundation models (GFMs) emerge as a paradigm-shifting…

Artificial Intelligence · Computer Science 2024-11-13 Hao Zhang , Jin-Jian Xu , Hong-Wei Cui , Lin Li , Yaowen Yang , Chao-Sheng Tang , Niklas Boers

Foundation models are transforming neuroscience but are often prohibitively large, data-hungry, and difficult to deploy. Here, we introduce BrainSymphony, a lightweight and parameter-efficient foundation model with plug-and-play integration…

Quantitative Methods · Quantitative Biology 2026-02-13 Moein Khajehnejad , Forough Habibollahi , Devon Stoliker , Adeel Razi

Medical foundation models (MFMs) aim to learn universal representations from multimodal medical images that can generalize effectively to diverse downstream clinical tasks. However, most existing MFMs suffer from information ambiguity that…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Yihang Liu , Longzhen Yang , Jiaxiong Yang , Ying Wen , Lianghua He , Heng Tao Shen

Highly accurate biomolecular structure prediction is a key component of developing biomolecular foundation models, and one of the most critical aspects of building foundation models is identifying the recipes for scaling the model. In this…

Biomolecules · Quantitative Biology 2026-01-02 Yi Zhou , Chan Lu , Yiming Ma , Wei Qu , Fei Ye , Kexin Zhang , Lan Wang , Minrui Gui , Quanquan Gu

Quantitative remote sensing inversion plays a critical role in environmental monitoring, enabling the estimation of key ecological variables such as vegetation indices, canopy structure, and carbon stock. Although vision foundation models…

Computer Vision and Pattern Recognition · Computer Science 2025-04-21 Zhenyu Yu , Mohd. Yamani Idna Idris , Pei Wang

The advent of large language models (LLMs) has heightened interest in their potential for multimodal applications that integrate language and vision. This paper explores the capabilities of GPT-4V in the realms of geography, environmental…

Computer Vision and Pattern Recognition · Computer Science 2023-12-29 Chenjiao Tan , Qian Cao , Yiwei Li , Jielu Zhang , Xiao Yang , Huaqin Zhao , Zihao Wu , Zhengliang Liu , Hao Yang , Nemin Wu , Tao Tang , Xinyue Ye , Lilong Chai , Ninghao Liu , Changying Li , Lan Mu , Tianming Liu , Gengchen Mai

To improve crop genetics, high-throughput, effective and comprehensive phenotyping is a critical prerequisite. While such tasks were traditionally performed manually, recent advances in multimodal foundation models, especially in…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Yu Wu , Guangzeng Han , Ibra Niang Niang , Francia Ravelombola , Maiara Oliveira , Jason Davis , Dong Chen , Feng Lin , Xiaolei Huang

Wireless foundation models (WFMs) have recently demonstrated promising capabilities, jointly performing multiple wireless functions and adapting effectively to new environments. However, while current WFMs process only one modality,…

Signal Processing · Electrical Eng. & Systems 2026-02-20 Ahmed Aboulfotouh , Hatem Abou-Zeid

Terrestrial carbon fluxes provide vital information about our biosphere's health and its capacity to absorb anthropogenic CO$_2$ emissions. The importance of predicting carbon fluxes has led to the emerging field of data-driven carbon flux…

Machine Learning · Computer Science 2025-03-25 Matthew Fortier , Mats L. Richter , Oliver Sonnentag , Chris Pal

All-atom molecular simulation serves as a quintessential ``computational microscope'' for understanding the machinery of life, yet it remains fundamentally limited by the trade-off between quantum-mechanical (QM) accuracy and biological…

Large language models applied to vast biological datasets have the potential to transform biology by uncovering disease mechanisms and accelerating drug development. However, current models are often siloed, trained separately on…

Machine fault diagnosis (FD) is a critical task for predictive maintenance, enabling early fault detection and preventing unexpected failures. Despite its importance, existing FD models are operation-specific with limited generalization…

Machine Learning · Computer Science 2025-11-06 Emadeldeen Eldele , Mohamed Ragab , Xu Qing , Edward , Zhenghua Chen , Min Wu , Xiaoli Li , Jay Lee

Artificial intelligence is transforming computational materials science, improving the prediction of material properties, and accelerating the discovery of novel materials. Recently, publicly available material data repositories have grown…

In recent years, multimodal medical data-based survival analysis has attracted much attention. However, real-world datasets often suffer from the problem of incomplete modality, where some patient modality information is missing due to…

Computer Vision and Pattern Recognition · Computer Science 2025-10-28 Yi Yin , Yuntao Shou , Zao Dai , Yun Peng , Tao Meng , Wei Ai , Keqin Li

Understanding soil is fundamental to agriculture, carbon cycling, and environmental sustainability, yet progress is limited by fragmented and heterogeneous datasets that constrain modeling to small-scale predictive settings rather than…

Machine Learning · Computer Science 2026-05-11 Kuangdai Leng , Simon Jeffery , Panos Panagos , Tarje Nissen-Meyer