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The emerging research shows that lncRNAs are associated with a series of complex human diseases. However, most of the existing methods have limitations in identifying nonlinear lncRNA-disease associations (LDAs), and it remains a huge…

Machine Learning · Computer Science 2024-05-07 Jin-Xing Liu , Wen-Yu Xi , Ling-Yun Dai , Chun-Hou Zheng , Ying-Lian Gao

The use of networks to integrate different genetic, proteomic, and metabolic datasets has been proposed as a viable path toward elucidating the origins of specific diseases. Here we introduce a new phenotypic database summarizing…

Biological Physics · Physics 2015-05-14 Cesar A. Hidalgo , Nicholas Blumm , Albert-Laszlo Barabasi , Nicholas Christakis

Accurate segmentation and classification of nuclei in histology images is critical but challenging due to nuclei heterogeneity, staining variations, and tissue complexity. Existing methods often struggle with limited dataset variability,…

Image and Video Processing · Electrical Eng. & Systems 2025-01-22 Wenhua Zhang , Sen Yang , Meiwei Luo , Chuan He , Yuchen Li , Jun Zhang , Xiyue Wang , Fang Wang

The Intensive Care Unit (ICU) is one of the most important parts of a hospital, which admits critically ill patients and provides continuous monitoring and treatment. Various patient outcome prediction methods have been attempted to assist…

Machine Learning · Computer Science 2023-10-24 Yuxi Liu , Zhenhao Zhang , Shaowen Qin , Flora D. Salim , Antonio Jimeno Yepes , Jun Shen , Jiang Bian

Modern disease classification often overlooks molecular commonalities hidden beneath divergent clinical presentations. This study introduces a transcriptomics-driven framework for discovering disease relationships by analyzing over 1300…

Genomics · Quantitative Biology 2025-08-08 Ke Chen , Haohan Wang

We propose a Healthcare Graph Convolutional Network (HealGCN) to offer disease self-diagnosis service for online users based on Electronic Healthcare Records (EHRs). Two main challenges are focused in this paper for online disease…

Machine Learning · Computer Science 2021-02-16 Zifeng Wang , Rui Wen , Xi Chen , Shilei Cao , Shao-Lun Huang , Buyue Qian , Yefeng Zheng

Prioritizing disease-associated genes is central to understanding the molecular mechanisms of complex disorders such as Alzheimer's disease (AD). Traditional network-based approaches rely on static centrality measures and often fail to…

Machine Learning · Computer Science 2026-03-04 Binon Teji , Subhajit Bandyopadhyay , Swarup Roy

This paper presents different neural network-based classifier algorithms for diagnosing and classifying Anemia. The study compares these classifiers with established models such as Feed Forward Neural Network (FFNN), Elman network, and…

Machine Learning · Computer Science 2024-04-09 Mohammed A. A. Elmaleeh

Alzheimer's disease (AD) is a heterogeneous, multifactorial neurodegenerative disorder characterized by beta-amyloid, pathologic tau, and neurodegeneration. There are no effective treatments for Alzheimer's disease at a late stage, urging…

Quantitative Methods · Quantitative Biology 2023-08-28 Enze Xu , Jingwen Zhang , Jiadi Li , Qianqian Song , Defu Yang , Guorong Wu , Minghan Chen

Initial hours of hospital admission impact clinical trajectory, but early clinical decisions often suffer due to data paucity. With clustering analysis for vital signs within six hours of admission, patient phenotypes with distinct…

Automatic depression detection on Twitter can help individuals privately and conveniently understand their mental health status in the early stages before seeing mental health professionals. Most existing black-box-like deep learning…

Computation and Language · Computer Science 2022-09-16 Sooji Han , Rui Mao , Erik Cambria

Automatic assessment of dysarthria remains a highly challenging task due to high variability in acoustic signals and the limited data. Currently, research on the automatic assessment of dysarthria primarily focuses on two approaches: one…

Audio and Speech Processing · Electrical Eng. & Systems 2024-05-08 Xiaokang Liu , Xiaoxia Du , Juan Liu , Rongfeng Su , Manwa Lawrence Ng , Yumei Zhang , Yudong Yang , Shaofeng Zhao , Lan Wang , Nan Yan

Diagnosing seizure onset zone (SOZ) is a challenge in neurosurgery, where stereoelectroencephalography (sEEG) serves as a critical technique. In sEEG SOZ identification, the existing studies focus solely on the intra-patient representation…

Machine Learning · Computer Science 2024-12-18 Huachao Yan , Kailing Guo , Shiwei Song , Yihai Dai , Xiaoqiang Wei , Xiaofen Xing , Xiangmin Xu

Graph neural network, as a powerful graph representation technique based on deep learning, has shown superior performance and attracted considerable research interest. However, it has not been fully considered in graph neural network for…

Social and Information Networks · Computer Science 2021-01-21 Xiao Wang , Houye Ji , Chuan Shi , Bai Wang , Peng Cui , P. Yu , Yanfang Ye

Alzheimer's disease (AD) has a complex and multifactorial etiology, which requires integrating information about neuroanatomy, genetics, and cerebrospinal fluid biomarkers for accurate diagnosis. Hence, recent deep learning approaches…

Machine Learning · Computer Science 2023-03-15 Tom Nuno Wolf , Sebastian Pölsterl , Christian Wachinger

The integration of diverse clinical modalities such as medical imaging and the tabular data extracted from patients' Electronic Health Records (EHRs) is a crucial aspect of modern healthcare. Integrative analysis of multiple sources can…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Daniel Duenias , Brennan Nichyporuk , Tal Arbel , Tammy Riklin Raviv

Dementia is a progressive neurodegenerative disorder with multiple etiologies, including Alzheimer's disease, Parkinson's disease, frontotemporal dementia, and vascular dementia. Its clinical and biological heterogeneity makes diagnosis and…

Machine Learning · Computer Science 2025-09-24 Niharika Tewari , Nguyen Linh Dan Le , Mujie Liu , Jing Ren , Ziqi Xu , Tabinda Sarwar , Veeky Baths , Feng Xia

Attention Deficit Hyperactivity Disorder (ADHD) is a neurodevelopmental disorder that is challenging to diagnose and requires advanced approaches for reliable and transparent identification and classification. It is characterized by a…

Machine Learning · Computer Science 2026-02-04 Abdul Rehman , Ilona Heldal , Jerry Chun-Wei Lin

Deriving disease subtypes from electronic health records (EHRs) can guide next-generation personalized medicine. However, challenges in summarizing and representing patient data prevent widespread practice of scalable EHR-based…

We are concerned with the challenge of reliably classifying and assessing intracranial aneurysms using deep learning without compromising clinical transparency. While traditional black-box models achieve high predictive accuracy, their lack…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Toqa Khaled , Ahmad Al-Kabbany
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