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Motivation: Model selection is a ubiquitous challenge in statistics. For penalized models, model selection typically entails tuning hyperparameters to maximize a measure of fit or minimize out-of-sample prediction error. However, these…

Methodology · Statistics 2025-05-29 Priyam Das , Sarah Robinson , Christine B. Peterson

Alloy cluster expansions (CEs) provide an accurate and computationally efficient mapping of the potential energy surface of multi-component systems that enables comprehensive sampling of the many-dimensional configuration space. Here, we…

Understanding video content is pivotal for advancing real-world applications like activity recognition, autonomous systems, and human-computer interaction. While scene graphs are adept at capturing spatial relationships between objects in…

Computer Vision and Pattern Recognition · Computer Science 2025-07-24 Raphael Ruschel , Md Awsafur Rahman , Hardik Prajapati , Suya You , B. S. Manjuanth

Graphical user interfaces (GUIs), due to their event driven nature, present a potentially unbounded space of all possible ways to interact with software. During testing it becomes necessary to effectively sample this space. In this paper we…

Software Engineering · Computer Science 2012-05-23 Stephan Arlt , Ishan Banerjee , Cristiano Bertolini , Atif M. Memon , Martin Schäf

This paper proposes a novel graphical model, termed the spatial dependence graph model, which captures the global dependence structure of different events that occur randomly in space. In the spatial dependence graph model, the edge set is…

Methodology · Statistics 2016-07-26 Matthias Eckardt

We introduce CCMnet, an R package designed to generate network ensembles that accurately reflect the uncertainty inherent in empirical data. While traditional network modeling often results in ensembles with fixed property values or…

Computation · Statistics 2026-03-04 Ravi Goyal , Victor De Gruttola , Natasha K. Martin , Lior Rennert , Jukka-Pekka Onnela

We present csSampling, an R package for estimation of Bayesian models for data collected from complex survey samples. csSampling combines functionality from the probabilistic programming language Stan (via the rstan and brms R packages) and…

Computation · Statistics 2023-08-15 Ryan Hornby , Matthew R. Williams , Terrance D. Savitsky , Mahmoud Elkasabi

We introduce cyclinbayes, an open-source R package for discovering linear causal relationships with both acyclic and cyclic structures. The package employs scalable Bayesian approaches with spike-and-slab priors to learn directed acyclic…

Computation · Statistics 2026-02-25 Robert Lee , Raymond K. W. Wong , Yang Ni

There are many applications where users seek to explore the impact of the settings of several categorical variables with respect to one dependent numerical variable. For example, a computer systems analyst might want to study how the type…

Graphics · Computer Science 2020-03-03 Anjul Tyagi , Zhen Cao , Tyler Estro , Erez Zadok , Klaus Mueller

We present vivid, an R package for visualizing variable importance and variable interactions in machine learning models. The package provides a range of displays including heatmap and graph-based displays for viewing variable importance and…

Computation · Statistics 2024-10-15 Alan Inglis , Andrew Parnell , Catherine Hurley

This letter introduced a new R package 'coexist' which can perform species coexistence simulation and analysis. The package was initially developed for understanding the role of different combinations of varying species growth rates,…

Populations and Evolution · Quantitative Biology 2014-04-11 Youhua Chen

We propose a new probabilistic programming language for the design and analysis of perception systems, especially those based on machine learning. Specifically, we consider the problems of training a perception system to handle rare events,…

Graphical models provide powerful tools to uncover complicated patterns in multivariate data and are commonly used in Bayesian statistics and machine learning. In this paper, we introduce the R package BDgraph which performs Bayesian…

Machine Learning · Statistics 2019-05-14 Reza Mohammadi , Ernst C. Wit

Spatial statistics is a growing discipline providing important analytical techniques in a wide range of disciplines in the natural and social sciences. In the R package GWmodel, we introduce techniques from a particular branch of spatial…

Applications · Statistics 2014-03-18 Isabella Gollini , Binbin Lu , Martin Charlton , Christopher Brunsdon , Paul Harris

Time series data are ubiquitous nowadays. Whereas most of the literature on the topic deals with real-valued time series, categorical time series have received much less attention. However, the development of data mining techniques for this…

Machine Learning · Statistics 2023-04-26 Ángel López Oriona , José Antonio Vilar Fernández

Systems that rely on forecasts to make decisions, e.g. control or energy trading systems, require frequent updates of the forecasts. Usually, the forecasts are updated whenever new observations become available, hence in an online setting.…

Ecologists and evolutionary biologists are relying on an increasingly sophisticated set of statistical tools to describe complex natural systems. One such tool that has gained increasing traction in the life sciences is structural equation…

Quantitative Methods · Quantitative Biology 2015-09-08 Jonathan S. Lefcheck

One of the most common applications of spatial data analysis is detecting zones, at a certain investigation level, where a point-referenced event under study is especially concentrated. The detection of this kind of zones, which are usually…

Computation · Statistics 2019-11-19 Álvaro Briz-Redón , Francisco Martínez-Ruiz , Francisco Montes

We present a unified representation for actionable spatial perception: 3D Dynamic Scene Graphs. Scene graphs are directed graphs where nodes represent entities in the scene (e.g. objects, walls, rooms), and edges represent relations (e.g.…

Robotics · Computer Science 2020-06-18 Antoni Rosinol , Arjun Gupta , Marcus Abate , Jingnan Shi , Luca Carlone

From a computer science viewpoint, a surgical domain model needs to be a conceptual one incorporating both behavior and data. It should therefore model actors, devices, tools, their complex interactions and data flow. To capture and model…

Computer Vision and Pattern Recognition · Computer Science 2021-06-30 Ege Özsoy , Evin Pınar Örnek , Ulrich Eck , Federico Tombari , Nassir Navab
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