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Related papers: SynTwins: A Retrosynthesis-Guided Framework for Sy…

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Machine learning (ML) holds great promise for clinical applications but is often hindered by limited access to high-quality data due to privacy concerns, high costs, and long timelines associated with clinical trials. While large language…

Computation and Language · Computer Science 2026-03-27 Zerui Xu , Fang Wu , Yingzhou Lu , Yuanyuan Zhang , Yue Zhao

Tackling the most pressing problems for humanity, such as the climate crisis and the threat of global pandemics, requires accelerating the pace of scientific discovery. While science has traditionally relied on trial and error and even…

Machine Learning · Computer Science 2023-06-28 Moksh Jain , Tristan Deleu , Jason Hartford , Cheng-Hao Liu , Alex Hernandez-Garcia , Yoshua Bengio

Identifying novel drug-target interactions (DTI) is a critical and rate limiting step in drug discovery. While deep learning models have been proposed to accelerate the identification process, we show that state-of-the-art models fail to…

Retrosynthesis planning enables the discovery of viable synthetic routes for target molecules, playing a crucial role in domains like drug discovery and materials design. Multi-step retrosynthetic planning remains computationally…

Artificial Intelligence · Computer Science 2025-09-29 Xiaozhuang Song , Xuanhao Pan , Xinjian Zhao , Hangting Ye , Shufei Zhang , Jian Tang , Tianshu Yu

Deep neural network (DNN) architectures, such as convolutional neural networks (CNN), involve heavy computation and require hardware, such as CPU, GPU, and AI accelerators, to provide the massive computing power. With the many varieties of…

Computer Vision and Pattern Recognition · Computer Science 2018-12-04 Wei Wei , Lingjie Xu , Lingling Jin , Wei Zhang , Tianjun Zhang

Text-to-image (T2I) models enable rapid concept design, making them widely used in AI-driven design. While recent studies focus on generating semantic and stylistic variations of given design concepts, functional coherence--the integration…

Computer Vision and Pattern Recognition · Computer Science 2025-12-05 Hyeonjeong Ha , Xiaomeng Jin , Jeonghwan Kim , Jiateng Liu , Zhenhailong Wang , Khanh Duy Nguyen , Ansel Blume , Nanyun Peng , Kai-Wei Chang , Heng Ji

CO2 reduction requires efficient catalysts, yet materials discovery remains bottlenecked by 10-20 year development cycles requiring deep domain expertise. This paper demonstrates how large language models can assist the catalyst discovery…

Materials Science · Physics 2026-03-18 AI Scientists , Xinyi Lin , Danqing Yin , Ying Guo

Our paper introduces a generative, multiagent AI framework designed to overcome the rigidity, limited flexibility and technical barriers of current bibliometric tools. The objective is to enable researchers to perform fully dynamic,…

Digital Libraries · Computer Science 2026-04-29 Adela Bara , Simona-Vasilica Oprea

The design of molecules and materials with tailored properties is challenging, as candidate molecules must satisfy multiple competing requirements that are often difficult to measure or compute. While molecular structures, produced through…

Chemical Physics · Physics 2023-02-07 Julia Westermayr , Joe Gilkes , Rhyan Barrett , Reinhard J. Maurer

Evaluation of large-scale fingerprint search algorithms has been limited due to lack of publicly available datasets. To address this problem, we utilize a Generative Adversarial Network (GAN) to synthesize a fingerprint dataset consisting…

Computer Vision and Pattern Recognition · Computer Science 2020-06-16 Vishesh Mistry , Joshua J. Engelsma , Anil K. Jain

Designing a single molecule that modulates two targets is a promising strategy for polypharmacology, but it remains substantially harder than standard single-target generation because one candidate must satisfy two binding requirements…

Machine Learning · Computer Science 2026-05-26 Qingyuan Zeng , Pengxiang Cai , Zixin Guan , Ziyang Chen , Anglin Liu , Lang Qin , Xinyao Lai , Jintai Chen

Among various aspects of ensuring the responsible design of AI tools for healthcare applications, addressing fairness concerns has been a key focus area. Specifically, given the wide spread of electronic health record (EHR) data and their…

Machine Learning · Computer Science 2025-06-30 Mirza Farhan Bin Tarek , Raphael Poulain , Rahmatollah Beheshti

The road to Artificial General Intelligence goes through the generation of context-aware reactive behaviors, where the Transformer architecture has been proven to be the state-of-the-art. However, they still fail to develop reasoning.…

Artificial Intelligence · Computer Science 2025-07-03 Alfredo Ibias , Miguel Rodriguez-Galindo , Hector Antona , Guillem Ramirez-Miranda , Enric Guinovart

Digital Twins (DTs) are computational models that simulate the states and temporal dynamics of real-world systems, playing a crucial role in prediction, understanding, and decision-making across diverse domains. However, existing approaches…

Machine Learning · Computer Science 2024-11-01 Samuel Holt , Tennison Liu , Mihaela van der Schaar

Retrosynthesis -- the process of identifying a set of reactants to synthesize a target molecule -- is of vital importance to material design and drug discovery. Existing machine learning approaches based on language models and graph neural…

Chemical Physics · Physics 2021-12-10 Ruoxi Sun , Hanjun Dai , Li Li , Steven Kearnes , Bo Dai

The design of protein sequences with desired functionalities is a fundamental task in protein engineering. Deep generative methods, such as autoregressive models and diffusion models, have greatly accelerated the discovery of novel protein…

Machine Learning · Computer Science 2025-04-16 Zitai Kong , Yiheng Zhu , Yinlong Xu , Hanjing Zhou , Mingzhe Yin , Jialu Wu , Hongxia Xu , Chang-Yu Hsieh , Tingjun Hou , Jian Wu

A genetic algorithm is suitable for exploring large search spaces as it finds an approximate solution. Because of this advantage, genetic algorithm is effective in exploring vast and unknown space such as molecular search space. Though the…

Neural and Evolutionary Computing · Computer Science 2021-12-24 Yurim Lee , Gydam Choi , Minsung Yoon , Cheongwon Kim

The discovery of novel mechanical metamaterials, whose properties are dominated by their engineered structures rather than chemical composition, is a knowledge-intensive and resource-demanding process. To accelerate the design of novel…

The rapid advancement of AI and computer vision has significantly increased the demand for high-quality annotated datasets, particularly for semantic segmentation. However, creating such datasets is resource-intensive, requiring substantial…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Ngoc-Do Tran , Minh-Tuan Huynh , Tam V. Nguyen , Minh-Triet Tran , Trung-Nghia Le

Graphics Program Synthesis is pivotal for interpreting and editing visual data, effectively facilitating the reverse-engineering of static visuals into editable TikZ code. While TikZ is the de facto standard for scientific schematics due to…

Computer Vision and Pattern Recognition · Computer Science 2026-04-08 Juekai Lin , Yun Zhu , Honglin Lin , Sijing Li , Tianwei Lin , Zheng Liu , Xiaoyang Wang , Wenqiao Zhang , Lijun Wu