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Related papers: NLP4Neuro: Sequence-to-sequence learning for neura…

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Large Language Models (LLMs) represent a class of deep learning models adept at understanding natural language and generating coherent responses to various prompts or queries. These models far exceed the complexity of conventional neural…

Machine Learning · Computer Science 2024-12-05 Minghao Shao , Abdul Basit , Ramesh Karri , Muhammad Shafique

The emergence of Large Language Models (LLMs) has fundamentally transformed natural language processing, making them indispensable across domains ranging from conversational systems to scientific exploration. However, their pre-trained…

Decoding brain functional states underlying different cognitive processes using multivariate pattern recognition techniques has attracted increasing interests in brain imaging studies. Promising performance has been achieved using brain…

Computer Vision and Pattern Recognition · Computer Science 2018-09-18 Hongming Li , Yong Fan

Neurons process information in ways that depend on their cell type, connectivity, and the brain region in which they are embedded. However, inferring these factors from neural activity remains a significant challenge. To build…

Machine Learning · Computer Science 2025-12-02 Vinam Arora , Divyansha Lachi , Ian J. Knight , Mehdi Azabou , Blake Richards , Cole L. Hurwitz , Josh Siegle , Eva L. Dyer

Large Language Models (LLMs) have been shown to be effective models of the human language system, with some models predicting most explainable variance of brain activity in current datasets. Even in untrained models, the representations…

Computation and Language · Computer Science 2024-06-24 Badr AlKhamissi , Greta Tuckute , Antoine Bosselut , Martin Schrimpf

Finding a code to unravel the population of neural responses that leads to a distinct animal behavior has been a long-standing question in the field of neuroscience. With the recent advances in machine learning, it is shown that the…

Neurons and Cognition · Quantitative Biology 2019-11-14 Asim Iqbal , Phil Dong , Christopher M Kim , Heeun Jang

Our ability to use deep learning approaches to decipher neural activity would likely benefit from greater scale, in terms of both model size and datasets. However, the integration of many neural recordings into one unified model is…

In recent years, multimodal large language models (MLLMs) have shown strong potential in real-world applications. They are developing rapidly due to their remarkable ability to comprehend multimodal information and their inherent powerful…

Computer Vision and Pattern Recognition · Computer Science 2024-08-02 Bozhou Li , Hao Liang , Zimo Meng , Wentao Zhang

Vision-language pretraining has advanced image-text alignment, yet progress in radiology remains constrained by the heterogeneity of clinical reports, including abbreviations, impression-only notes, and stylistic variability. Unlike…

Computer Vision and Pattern Recognition · Computer Science 2025-09-22 Hanbin Ko , Gihun Cho , Inhyeok Baek , Donguk Kim , Joonbeom Koo , Changi Kim , Dongheon Lee , Chang Min Park

Large language models exhibit a puzzling inconsistency: they solve complex problems yet frequently fail on seemingly simpler ones. We investigate whether LLMs internally encode problem difficulty in a way that aligns with human judgment,…

Computation and Language · Computer Science 2025-10-22 William Lugoloobi , Chris Russell

Learning high-quality text representations is fundamental to a wide range of NLP tasks. While encoder pretraining has traditionally relied on Masked Language Modeling (MLM), recent evidence suggests that decoder models pretrained with…

Using pre-trained large language models (LLMs) as a backbone for time series prediction has recently attracted growing research interest. Existing approaches typically split time series into patches, map them to the token space of LLMs via…

Machine Learning · Computer Science 2026-03-09 Xinyu Zhang , Shanshan Feng , Xutao Li , Kenghong Lin , Fan Li , Pengfei Jia

Node classification is a fundamental task in graph analysis, with broad applications across various fields. Recent breakthroughs in Large Language Models (LLMs) have enabled LLM-based approaches for this task. Although many studies…

Machine Learning · Computer Science 2025-05-21 Xixi Wu , Yifei Shen , Fangzhou Ge , Caihua Shan , Yizhu Jiao , Xiangguo Sun , Hong Cheng

In recent years, large language models (LLMs) have made remarkable progress, with model optimization primarily relying on gradient-based optimizers such as Adam. However, these gradient-based methods impose stringent hardware requirements,…

Artificial Intelligence · Computer Science 2025-10-24 WenTao Liu , Siyu Song , Hao Hao , Aimin Zhou

We propose a method to teach multiple large language models (LLM) to collaborate by interleaving their generations at the token level. We model the decision of which LLM generates the next token as a latent variable. By optimizing the…

Computation and Language · Computer Science 2024-08-28 Shannon Zejiang Shen , Hunter Lang , Bailin Wang , Yoon Kim , David Sontag

Fine-tuning pre-trained large language models (LLMs) on a diverse array of tasks has become a common approach for building models that can solve various natural language processing (NLP) tasks. However, where and to what extent these models…

Computation and Language · Computer Science 2024-10-29 Zheng Zhao , Yftah Ziser , Shay B. Cohen

Objectives: The vast and complex nature of human genomic sequencing data presents challenges for effective analysis. This review aims to investigate the application of Natural Language Processing (NLP) techniques, particularly Large…

Genomics · Quantitative Biology 2025-02-28 Shuyan Cheng , Yishu Wei , Yiliang Zhou , Zihan Xu , Drew N Wright , Jinze Liu , Yifan Peng

Large language models (LLMs) exhibit remarkable capabilities across a wide range of tasks, yet their internal mechanisms remain largely opaque. In this paper, we introduce a simple, lightweight, and broadly applicable method with a focus on…

Computation and Language · Computer Science 2025-11-27 Yixiu Zhao , Xiaozhi Wang , Zijun Yao , Lei Hou , Juanzi Li

Large language models (LLMs) often develop learned mechanisms specialized to specific datasets, such as reliance on domain-specific correlations, which yield high-confidence predictions without generalizable reasoning. While beneficial in…

Computation and Language · Computer Science 2025-07-15 Ameen Ali , Shahar Katz , Lior Wolf , Ivan Titov

Behavioral alignment in large language models (LLMs) is often achieved through broad fine-tuning, which can result in undesired side effects like distributional shift and low interpretability. We propose a method for alignment that…

Machine Learning · Computer Science 2026-01-28 Claire O'Brien , Jessica Seto , Dristi Roy , Aditya Dwivedi , Sunishchal Dev , Kevin Zhu , Sean O'Brien , Ashwinee Panda , Ryan Lagasse