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Related papers: Benchmarking the Discovery Engine

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Machine learning (ML) algorithms are showing a growing trend in helping the scientific communities across different disciplines and institutions to address large and diverse data problems. However, many available ML tools are…

In this community review report, we discuss applications and techniques for fast machine learning (ML) in science -- the concept of integrating power ML methods into the real-time experimental data processing loop to accelerate scientific…

Machine Learning · Computer Science 2023-02-07 Allison McCarn Deiana , Nhan Tran , Joshua Agar , Michaela Blott , Giuseppe Di Guglielmo , Javier Duarte , Philip Harris , Scott Hauck , Mia Liu , Mark S. Neubauer , Jennifer Ngadiuba , Seda Ogrenci-Memik , Maurizio Pierini , Thea Aarrestad , Steffen Bahr , Jurgen Becker , Anne-Sophie Berthold , Richard J. Bonventre , Tomas E. Muller Bravo , Markus Diefenthaler , Zhen Dong , Nick Fritzsche , Amir Gholami , Ekaterina Govorkova , Kyle J Hazelwood , Christian Herwig , Babar Khan , Sehoon Kim , Thomas Klijnsma , Yaling Liu , Kin Ho Lo , Tri Nguyen , Gianantonio Pezzullo , Seyedramin Rasoulinezhad , Ryan A. Rivera , Kate Scholberg , Justin Selig , Sougata Sen , Dmitri Strukov , William Tang , Savannah Thais , Kai Lukas Unger , Ricardo Vilalta , Belinavon Krosigk , Thomas K. Warburton , Maria Acosta Flechas , Anthony Aportela , Thomas Calvet , Leonardo Cristella , Daniel Diaz , Caterina Doglioni , Maria Domenica Galati , Elham E Khoda , Farah Fahim , Davide Giri , Benjamin Hawks , Duc Hoang , Burt Holzman , Shih-Chieh Hsu , Sergo Jindariani , Iris Johnson , Raghav Kansal , Ryan Kastner , Erik Katsavounidis , Jeffrey Krupa , Pan Li , Sandeep Madireddy , Ethan Marx , Patrick McCormack , Andres Meza , Jovan Mitrevski , Mohammed Attia Mohammed , Farouk Mokhtar , Eric Moreno , Srishti Nagu , Rohin Narayan , Noah Palladino , Zhiqiang Que , Sang Eon Park , Subramanian Ramamoorthy , Dylan Rankin , Simon Rothman , Ashish Sharma , Sioni Summers , Pietro Vischia , Jean-Roch Vlimant , Olivia Weng

Process mining allows analysts to exploit logs of historical executions of business processes to extract insights regarding the actual performance of these processes. One of the most widely studied process mining operations is automated…

The success of language models, especially transformer-based architectures, has trickled into other domains giving rise to "scientific language models" that operate on small molecules, proteins or polymers. In chemistry, language models…

Chemical Physics · Physics 2024-10-22 Nikita Janakarajan , Tim Erdmann , Sarath Swaminathan , Teodoro Laino , Jannis Born

Molecular machine learning has been maturing rapidly over the last few years. Improved methods and the presence of larger datasets have enabled machine learning algorithms to make increasingly accurate predictions about molecular…

The expanding Lean 4 ecosystem poses challenges for navigating its vast libraries. This paper introduces LeanExplore, a search engine for Lean 4 declarations. LeanExplore enables users to semantically search for statements, both formally…

Software Engineering · Computer Science 2025-06-16 Justin Asher

In the upcoming decade, deep learning may revolutionize the natural sciences, enhancing our capacity to model and predict natural occurrences. This could herald a new era of scientific exploration, bringing significant advancements across…

Artificial Intelligence · Computer Science 2023-10-13 Shuaiwen Leon Song , Bonnie Kruft , Minjia Zhang , Conglong Li , Shiyang Chen , Chengming Zhang , Masahiro Tanaka , Xiaoxia Wu , Jeff Rasley , Ammar Ahmad Awan , Connor Holmes , Martin Cai , Adam Ghanem , Zhongzhu Zhou , Yuxiong He , Pete Luferenko , Divya Kumar , Jonathan Weyn , Ruixiong Zhang , Sylwester Klocek , Volodymyr Vragov , Mohammed AlQuraishi , Gustaf Ahdritz , Christina Floristean , Cristina Negri , Rao Kotamarthi , Venkatram Vishwanath , Arvind Ramanathan , Sam Foreman , Kyle Hippe , Troy Arcomano , Romit Maulik , Maxim Zvyagin , Alexander Brace , Bin Zhang , Cindy Orozco Bohorquez , Austin Clyde , Bharat Kale , Danilo Perez-Rivera , Heng Ma , Carla M. Mann , Michael Irvin , J. Gregory Pauloski , Logan Ward , Valerie Hayot , Murali Emani , Zhen Xie , Diangen Lin , Maulik Shukla , Ian Foster , James J. Davis , Michael E. Papka , Thomas Brettin , Prasanna Balaprakash , Gina Tourassi , John Gounley , Heidi Hanson , Thomas E Potok , Massimiliano Lupo Pasini , Kate Evans , Dan Lu , Dalton Lunga , Junqi Yin , Sajal Dash , Feiyi Wang , Mallikarjun Shankar , Isaac Lyngaas , Xiao Wang , Guojing Cong , Pei Zhang , Ming Fan , Siyan Liu , Adolfy Hoisie , Shinjae Yoo , Yihui Ren , William Tang , Kyle Felker , Alexey Svyatkovskiy , Hang Liu , Ashwin Aji , Angela Dalton , Michael Schulte , Karl Schulz , Yuntian Deng , Weili Nie , Josh Romero , Christian Dallago , Arash Vahdat , Chaowei Xiao , Thomas Gibbs , Anima Anandkumar , Rick Stevens

In the NLP community, recent years have seen a surge of research activities that address machines' ability to perform deep language understanding which goes beyond what is explicitly stated in text, rather relying on reasoning and knowledge…

Computation and Language · Computer Science 2020-02-27 Shane Storks , Qiaozi Gao , Joyce Y. Chai

This master thesis describes an algorithm for automated categorization of scientific documents using deep learning techniques and compares the results to the results of existing classification algorithms. As an additional goal a reusable…

Information Retrieval · Computer Science 2017-06-20 Thomas Krause

The emergence of "big data" offers unprecedented opportunities for not only accelerating scientific advances but also enabling new modes of discovery. Scientific progress in many disciplines is increasingly enabled by our ability to examine…

Computers and Society · Computer Science 2017-07-03 Vasant G. Honavar , Mark D. Hill , Katherine Yelick

Machine learning models are increasingly integrated into societally critical applications such as recidivism prediction and medical diagnosis, thanks to their superior predictive power. In these applications, however, full automation is…

Human-Computer Interaction · Computer Science 2020-03-18 Vivian Lai , Samuel Carton , Chenhao Tan

Large language models are a form of artificial intelligence systems whose primary knowledge consists of the statistical patterns, semantic relationships, and syntactical structures of language1. Despite their limited forms of "knowledge",…

Artificial Intelligence · Computer Science 2023-10-13 Yizhen Zheng , Huan Yee Koh , Jiaxin Ju , Anh T. N. Nguyen , Lauren T. May , Geoffrey I. Webb , Shirui Pan

Automated machine learning (AutoML) and deep learning (DL) are two cutting-edge paradigms used to solve a myriad of inductive learning tasks. In spite of their successes, little guidance exists for when to choose one approach over the other…

Machine Learning · Computer Science 2021-10-25 Joseph D. Romano , Trang T. Le , Weixuan Fu , Jason H. Moore

We apply foundation models to data discovery and exploration tasks. Foundation models include large language models (LLMs) that show promising performance on a range of diverse tasks unrelated to their training. We show that these models…

Databases · Computer Science 2024-04-09 Moe Kayali , Anton Lykov , Ilias Fountalis , Nikolaos Vasiloglou , Dan Olteanu , Dan Suciu

There is a need of ensuring machine learning models that are interpretable. Higher interpretability of the model means easier comprehension and explanation of future predictions for end-users. Further, interpretable machine learning models…

Machine Learning · Computer Science 2020-08-17 Gregor Stiglic , Primoz Kocbek , Nino Fijacko , Marinka Zitnik , Katrien Verbert , Leona Cilar

This survey presents an overview of integrating prior knowledge into machine learning systems in order to improve explainability. The complexity of machine learning models has elicited research to make them more explainable. However, most…

The exponential growth of astronomical literature poses significant challenges for researchers navigating and synthesizing general insights or even domain-specific knowledge. We present Pathfinder, a machine learning framework designed to…

Artificial intelligence (AI) tools are being incorporated into scientific research workflows with the potential to enhance efficiency in tasks such as document analysis, question answering (Q&A), and literature search. However, system…

Artificial Intelligence · Computer Science 2026-05-13 Anthea Dathe , Kiran Hoffmann , Aline Mangold

In the field of machine learning, data understanding is the practice of getting initial insights in unknown datasets. Such knowledge-intensive tasks require a lot of documentation, which is necessary for data scientists to grasp the meaning…

Databases · Computer Science 2018-06-14 Markus Schröder , Christian Jilek , Jörn Hees , Andreas Dengel

Recent efforts in Machine Learning (ML) interpretability have focused on creating methods for explaining black-box ML models. However, these methods rely on the assumption that simple approximations, such as linear models or decision-trees,…

Machine Learning · Computer Science 2019-06-13 Owen Lahav , Nicholas Mastronarde , Mihaela van der Schaar