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This chapter critically examines the potential contributions of modern language models to theoretical linguistics. Despite their focus on engineering goals, these models' ability to acquire sophisticated linguistic knowledge from mere…

Computation and Language · Computer Science 2024-08-15 Raphaël Millière

Metagenomics provides a powerful new tool set for investigating evolutionary interactions with the environment. However, an absence of model-based statistical methods means that researchers are often not able to make full use of this…

Quantitative Methods · Quantitative Biology 2013-06-27 John O'Brien , Xavier Didelot , Zamin Iqbal , LucasAmenga-Etego , Bartu Ahiska , Daniel Falush

Collecting high-quality training data is essential for fine-tuning Large Language Models (LLMs). However, acquiring such data is often costly and time-consuming, especially for non-English languages such as Italian. Recently, researchers…

Computation and Language · Computer Science 2025-04-01 Fatemeh Mohammadi , Tommaso Romano , Samira Maghool , Paolo Ceravolo

Acquiring commonsense knowledge and reasoning is recognized as an important frontier in achieving general Artificial Intelligence (AI). Recent research in the Natural Language Processing (NLP) community has demonstrated significant progress…

Artificial Intelligence · Computer Science 2021-01-20 Ke Shen , Mayank Kejriwal

WordNet proved that it is possible to construct a large-scale electronic lexical database on the principles of lexical semantics. It has been accepted and used extensively by computational linguists ever since it was released. Inspired by…

Computation and Language · Computer Science 2012-04-03 Mario Jarmasz

Evolutionary models of languages are usually considered to take the form of trees. With the development of so-called tree constraints the plausibility of the tree model assumptions can be addressed by checking whether the moments of…

Applications · Statistics 2014-10-06 Nathaniel Shiers , John A. D. Aston , Jim Q. Smith , John S. Coleman

Multiple datasets containing different types of features may be available for a given task. For instance, users' profiles can be used to group users for recommendation systems. In addition, a model can also use users' historical behaviors…

Machine Learning · Computer Science 2016-05-10 Weixiang Shao , Xiaoxiao Shi , Philip S. Yu

A binary phylogenetic network may or may not be obtainable from a tree by the addition of directed edges (arcs) between tree arcs. Here, we establish a precise and easily tested criterion (based on `2-SAT') that efficiently determines…

Populations and Evolution · Quantitative Biology 2015-05-25 Andrew R. Francis , Mike Steel

Binary trait data record the presence or absence of distinguishing traits in individuals. We treat the problem of estimating ancestral trees with time depth from binary trait data. Simple analysis of such data is problematic. Each homology…

Methodology · Statistics 2009-08-31 Geoff K. Nicholls , Russell D. Gray

Recent research has shown that language and the socio-cognitive phenomena associated with it can be aptly modeled and visualized through networks of linguistic entities. However, most of the existing works on linguistic networks focus only…

Computation and Language · Computer Science 2009-01-18 Animesh Mukherjee , Monojit Choudhury , Ravi Kannan

The displayed tree phylogenetic network model is shown to sit as a natural submodel of the graphical model associated to a directed acyclic graph (DAG). This representation allows to derive a number of results about the displayed tree…

Populations and Evolution · Quantitative Biology 2025-08-01 Seth Sullivant

Phonological reconstruction is one of the central problems in historical linguistics where a proto-word of an ancestral language is determined from the observed cognate words of daughter languages. Computational approaches to historical…

Computation and Language · Computer Science 2023-12-27 V. S. D. S. Mahesh Akavarapu , Arnab Bhattacharya

One of the goals of phylogenetic research is to find the species tree describing the evolutionary history of a set of species. But the trees derived from geneti data with the help of tree inference methods are gene trees that need not…

Populations and Evolution · Quantitative Biology 2015-07-28 Mareike Fischer , Martin Kreidl

Bayesian inference is now a leading technique for reconstructing phylogenetic trees from aligned sequence data. In this short note, we formally show that the maximum posterior tree topology provides a statistically consistent estimate of a…

Populations and Evolution · Quantitative Biology 2013-07-12 Mike Steel

Phylogenetic networks are a type of leaf-labelled, acyclic, directed graph used by biologists to represent the evolutionary history of species whose past includes reticulation events. A phylogenetic network is tree-child if each non-leaf…

Combinatorics · Mathematics 2017-11-27 Magnus Bordewich , Katharina T Huber , Vincent Moulton , Charles Semple

Identifying similar documents within extensive volumes of data poses a significant challenge. To tackle this issue, researchers have developed a variety of effective distributed computing techniques. With the advancement of computing power…

Neural and Evolutionary Computing · Computer Science 2025-07-17 Chandrashekar Muniyappa , Eunjin Kim

With the rising popularity of user-generated genealogical family trees, new genealogical information systems have been developed. State-of-the-art natural question answering algorithms use deep neural network (DNN) architecture based on…

Computation and Language · Computer Science 2023-08-01 Omri Suissa , Maayan Zhitomirsky-Geffet , Avshalom Elmalech

A coreset is a small set that can approximately preserve the structure of the original input data set. Therefore we can run our algorithm on a coreset so as to reduce the total computational complexity. Conventional coreset techniques…

Machine Learning · Computer Science 2022-10-11 Jiaxiang Chen , Qingyuan Yang , Ruomin Huang , Hu Ding

The study of ancient writings has great value for archaeology and philology. Essential forms of material are photographic characters, but manual photographic character recognition is extremely time-consuming and expertise-dependent.…

Computer Vision and Pattern Recognition · Computer Science 2023-03-14 Hongxiang Huang , Daihui Yang , Gang Dai , Zhen Han , Yuyi Wang , Kin-Man Lam , Fan Yang , Shuangping Huang , Yongge Liu , Mengchao He

The application of phylogenetic techniques to the documentation of cultural history can present a distorted picture due to horizontal transmission and blending. Moreover, the units of cultural transmission must be communicable concepts,…

Populations and Evolution · Quantitative Biology 2019-07-11 Liane Gabora , Stefan Leijnen , Tomas Veloz , Carl Lipo
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