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SMeagol is a software tool to simulate highly realistic microscopy data based on spatial systems biology models, in order to facilitate development, validation, and optimization of advanced analysis methods for live cell single molecule…

Biological Physics · Physics 2017-05-08 Martin Lindén , Vladimir Ćurić , Alexis Boucharin , David Fange , Johan Elf

We present a method for creating simulated galaxy catalogs with realistic galaxy luminosities, broad-band colors, and projected clustering over large cosmic volumes. The technique, denoted ADDGALS (Adding Density Dependent GAlaxies to…

Cosmology and Nongalactic Astrophysics · Physics 2022-06-15 Risa H. Wechsler , Joseph DeRose , Michael T. Busha , Matthew R. Becker , Eli Rykoff , August Evrard

Obtaining reliable, matched photometry for galaxies imaged by different observatories represents a key challenge in the era of wide-field surveys spanning more than several hundred square degrees. Methods such as flux fitting, profile…

Instrumentation and Methods for Astrophysics · Physics 2015-06-12 Kevin Bundy , David W. Hogg , Tim D. Higgs , Robert C. Nichol , Naoki Yasuda , Karen L. Masters , Dustin Lang , David A. Wake

We present MXtalTools, a flexible Python package for the data-driven modelling of molecular crystals, facilitating machine learning studies of the molecular solid state. MXtalTools comprises several classes of utilities: (1) synthesis,…

Machine Learning · Computer Science 2025-11-26 Michael Kilgour , Mark E. Tuckerman , Jutta Rogal

One of the most promising ways to observe the Universe is by detecting the 21cm emission from cosmic neutral hydrogen (HI) through radio-telescopes. Those observations can shed light on fundamental astrophysical questions only if accurate…

In today's modern wide-field galaxy surveys, there is the necessity for parametric surface brightness decomposition codes characterised by accuracy, small degree of user intervention, and high degree of parallelisation. We try to address…

Astrophysics of Galaxies · Physics 2023-03-03 Luca Tortorelli , Amata Mercurio

A new cosmic shear analysis pipeline SUNGLASS (Simulated UNiverses for Gravitational Lensing Analysis and Shear Surveys) is introduced. SUNGLASS is a pipeline that rapidly generates simulated universes for weak lensing and cosmic shear…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-20 A. Kiessling , A. F. Heavens , A. N. Taylor

Galaxy spectral energy distributions (SEDs) remain among the most challenging yet informative quantities to reproduce in simulations due to the large and complex mixture of physical processes that shape the radiation output of a galaxy.…

Astrophysics of Galaxies · Physics 2020-07-22 Matías Bravo , Claudia del P. Lagos , Aaron S. G. Robotham , Sabine Bellstedt , Danail Obreschkow

High-fidelity galaxy mocks are crucial for validating analysis pipelines and for cosmological inference. In this context, the Science Pipeline at PIC (SciPIC) is a pipeline specifically designed for the fast generation of synthetic galaxy…

Cosmology and Nongalactic Astrophysics · Physics 2026-04-17 Euclid Collaboration , E. J. Gonzalez , J. Carretero , Z. Baghkhani , F. J. Castander , P. Fosalba , P. Tallada-Crespí , J. Stadel , D. Potter , I. Tutusaus , S. Ramakrishnan , M. L. van Heukelum , N. E. Chisari , F. Marulli , M. Bolzonella , L. Pozzetti , D. Navarro-Gironés , J. Chaves-Montero , G. Parimbelli , M. Manera , L. Blot , K. Hoffmann , M. Huertas-Company , P. Monaco , C. Scarlata , M. -A. Breton , S. -S. Li , R. Teyssier , M. Crocce , G. Congedo , A. Biviano , M. Hirschmann , A. Pezzotta , H. Hoekstra , W. J. Percival , P. A. Oesch , R. A. A. Bowler , V. Gonzalez-Perez , S. Avila , A. Kovács , B. Altieri , S. Andreon , N. Auricchio , C. Baccigalupi , M. Baldi , S. Bardelli , P. Battaglia , E. Branchini , M. Brescia , S. Camera , V. Capobianco , C. Carbone , S. Casas , M. Castellano , G. Castignani , S. Cavuoti , A. Cimatti , C. Colodro-Conde , L. Conversi , Y. Copin , F. Courbin , H. M. Courtois , H. Degaudenzi , S. de la Torre , G. De Lucia , H. Dole , F. Dubath , X. Dupac , S. Escoffier , M. Farina , R. Farinelli , S. Farrens , F. Faustini , S. Ferriol , F. Finelli , S. Fotopoulou , N. Fourmanoit , M. Frailis , E. Franceschi , M. Fumana , S. Galeotta , K. George , B. Gillis , C. Giocoli , J. Gracia-Carpio , A. Grazian , F. Grupp , L. Guzzo , S. V. H. Haugan , W. Holmes , F. Hormuth , A. Hornstrup , K. Jahnke , M. Jhabvala , B. Joachimi , S. Kermiche , A. Kiessling , B. Kubik , M. Kümmel , M. Kunz , H. Kurki-Suonio , A. M. C. Le Brun , S. Ligori , P. B. Lilje , V. Lindholm , I. Lloro , G. Mainetti , O. Mansutti , O. Marggraf , M. Martinelli , N. Martinet , R. J. Massey , E. Medinaceli , S. Mei , M. Meneghetti , E. Merlin , G. Meylan , A. Mora , M. Moresco , L. Moscardini , R. Nakajima , C. Neissner , S. -M. Niemi , J. W. Nightingale , C. Padilla , S. Paltani , F. Pasian , K. Pedersen , V. Pettorino , S. Pires , G. Polenta , L. A. Popa , F. Raison , A. Renzi , J. Rhodes , G. Riccio , E. Romelli , M. Roncarelli , R. Saglia , Z. Sakr , A. G. Sánchez , D. Sapone , B. Sartoris , P. Schneider , T. Schrabback , A. Secroun , S. Serrano , E. Sihvola , P. Simon , C. Sirignano , G. Sirri , A. Spurio Mancini , L. Stanco , A. N. Taylor , I. Tereno , S. Toft , R. Toledo-Moreo , F. Torradeflot , J. Valiviita , T. Vassallo , G. Verdoes Kleijn , Y. Wang , J. Weller , G. Zamorani , F. M. Zerbi , E. Zucca , V. Allevato , M. Ballardini , C. Burigana , R. Cabanac , M. Calabrese , A. Cappi , T. Castro , J. A. Escartin Vigo , L. Gabarra , J. García-Bellido , J. Macias-Perez , R. Maoli , J. Martín-Fleitas , N. Mauri , R. B. Metcalf , A. Montoro , A. A. Nucita , M. Pöntinen , V. Scottez , M. Sereno , M. Tenti , M. Tucci , M. Viel , M. Wiesmann , Y. Akrami , I. T. Andika , G. Angora , S. Anselmi , M. Archidiacono , F. Atrio-Barandela , L. Bazzanini , J. Bel , D. Bertacca , M. Bethermin , F. Beutler , A. Blanchard , M. Bonici , M. L. Brown , S. Bruton , A. Calabro , B. Camacho Quevedo , F. Caro , C. S. Carvalho , F. Cogato , A. R. Cooray , O. Cucciati , T. de Boer , G. Desprez , A. Díaz-Sánchez , S. Di Domizio , J. M. Diego , V. Duret , M. Y. Elkhashab , A. Enia , Y. Fang , A. Finoguenov , A. Franco , K. Ganga , T. Gasparetto , R. Gavazzi , E. Gaztanaga , F. Giacomini , F. Gianotti , G. Gozaliasl , A. Gruppuso , M. Guidi , C. M. Gutierrez , A. Hall , C. Hernández-Monteagudo , H. Hildebrandt , J. Hjorth , J. J. E. Kajava , Y. Kang , V. Kansal , D. Karagiannis , K. Kiiveri , J. Kim , C. C. Kirkpatrick , K. Koyama , S. Kruk , M. C. Lam , M. Lattanzi , L. Legrand , M. Lembo , G. Leroy , G. F. Lesci , J. Lesgourgues , T. I. Liaudat , S. J. Liu , X. Lopez Lopez , M. Magliocchetti , A. Manjón-García , F. Mannucci , C. J. A. P. Martins , L. Maurin , M. Miluzio , C. Moretti , G. Morgante , S. Nadathur , K. Naidoo , A. Navarro-Alsina , S. Nesseris , F. Pace , D. Paoletti , F. Passalacqua , K. Paterson , L. Patrizii , C. Pattison , R. Paviot , A. Pisani , G. W. Pratt , S. Quai , M. Radovich , K. Rojas , W. Roster , S. Sacquegna , M. Sahlén , D. B. Sanders , E. Sarpa , A. Schneider , M. Schultheis , D. Sciotti , E. Sellentin , L. C. Smith , J. G. Sorce , I. Szapudi , K. Tanidis , F. Tarsitano , G. Testera , S. Tosi , A. Troja , C. Uhlemann , C. Valieri , A. Venhola , D. Vergani , G. Verza , P. Vielzeuf , S. Vinciguerra , M. von Wietersheim-Kramsta , N. A. Walton , A. H. Wright , H. W. Yeung

We present the open-source image processing software package PySAP (Python Sparse data Analysis Package) developed for the COmpressed Sensing for Magnetic resonance Imaging and Cosmology (COSMIC) project. This package provides a set of…

Instrumentation and Methods for Astrophysics · Physics 2020-07-03 S. Farrens , A. Grigis , L. El Gueddari , Z. Ramzi , Chaithya G. R. , S. Starck , B. Sarthou , H. Cherkaoui , P. Ciuciu , J. -L. Starck

The next generation of cosmological spectroscopic sky surveys will probe the distribution of matter across several Gigaparsecs (Gpc) or many billion light-years. In order to leverage the rich data in these new maps to gain a better…

Cosmology and Nongalactic Astrophysics · Physics 2025-10-08 Cooper Jacobus , Roger de Belsunce , Solene Chabanier , Peter Harrington , JD Emberson , Zarija Lukić , Salman Habib

We present a newly developed software package which implements a wide range of routines frequently used in Weak Gravitational Lensing (WL). With the continuously increasing size of the WL scientific community we feel that easy to use…

Cosmology and Nongalactic Astrophysics · Physics 2016-11-18 Andrea Petri

We present the 'simage' software suite for the simulation of artificial extragalactic images, based empirically around real observations of the Hubble Ultra Deep Field (UDF). The simulations reproduce galaxies with realistic and complex…

Instrumentation and Methods for Astrophysics · Physics 2015-05-19 Benjamin M. Dobke , David E. Johnston , Richard Massey , F. William High , Matthew Ferry , Jason Rhodes , R. Ali Vanderveld

We present a new Python pipeline for processing data from astronomical long-slit spectroscopy observations recorded with CCD detectors. The pipeline is designed to aim for simplicity, manual execution, transparency and robustness. The goal…

Instrumentation and Methods for Astrophysics · Physics 2025-04-02 Kostas Valeckas , Johan Peter Uldall Fynbo , Jens-Kristian Krogager , Kasper Elm Heintz

modAL is a modular active learning framework for Python, aimed to make active learning research and practice simpler. Its distinguishing features are (i) clear and modular object oriented design (ii) full compatibility with scikit-learn…

Machine Learning · Computer Science 2018-12-13 Tivadar Danka , Peter Horvath

We present SynthPop, a new open source, modular population synthesis Galactic modeling software to simulate catalogs of Milky Way stars along any sightline outward from the Sun. Motivated by a lack flexibility in existing Galactic models,…

Instrumentation and Methods for Astrophysics · Physics 2025-04-16 Jonas Klüter , Macy J. Huston , Abigail Aronica , Samson A. Johnson , Matthew Penny , Marz Newman , Farzaneh Zohrabi , Alison L. Crisp , Allison Chevis

There are a number of different phenomena in the early universe that have to be studied numerically with lattice simulations. This paper presents a graphics processing unit (GPU) accelerated Python program called PyCOOL that solves the…

Instrumentation and Methods for Astrophysics · Physics 2015-06-03 Jani Sainio

The current and forthcoming observations of large samples of high-redshift galaxies selected according to various photometric and spectroscopic criteria can be interpreted in the context of galaxy formation, by means of models of evolving…

Astrophysics · Physics 2007-05-23 B. Guiderdoni , J. E. G. Devriendt

Modern cosmological hydrodynamical galaxy simulations provide tens of thousands of reasonably realistic synthetic galaxies across cosmic time. However, quantitatively assessing the level of realism of simulated universes in comparison to…

We introduce a new model for the spectral energy distribution of galaxies, GRASIL-3D, which includes a careful modelling of the dust component of the interstellar medium. GRASIL-3D is an entirely new model based on the formalism of an…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-18 R. Domínguez-Tenreiro , A. Obreja , G. L. Granato , A. Schurer , P. Alpresa , L. Silva , C. B. Brook , A. Serna