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Microscopic processes on surfaces such as adsorption, desorption, diffusion and reaction of interacting particles can be simulated using kinetic Monte Carlo (kMC) algorithms. Even though kMC methods are accurate, they are computationally…

Mathematical Physics · Physics 2013-12-24 Yannis Pantazis , Markos Katsoulakis

Efficient sampling of two-dimensional statistical physics systems remains a central challenge in computational statistical physics. Traditional Markov chain Monte Carlo (MCMC) methods, including cluster algorithms, provide only partial…

Statistical Mechanics · Physics 2025-09-24 Tao Chen , Jingtong Zhang , Jing Liu , Youjin Deng , Pan Zhang

A multilevel Monte Carlo (MLMC) method for quantifying model-form uncertainties associated with the Reynolds-Averaged Navier-Stokes (RANS) simulations is presented. Two, high-dimensional, stochastic extensions of the RANS equations are…

Computational Physics · Physics 2018-11-05 Prashant Kumar , Martin Schmelzer , Richard P. Dwight

Despite the development of an extensive toolbox of multi-scale rarefied flow simulators, such simulations remain challenging due to the significant disparity of collisional and macroscopic spatio-temporal scales. Our study offers a novel…

Fluid Dynamics · Physics 2022-08-17 Marcel Pfeiffer , Félix Garmirian , M. Hossein Gorji

Traditional gradient-based sampling methods, like standard Hamiltonian Monte Carlo, require that the desired target distribution is continuous and differentiable. This limits the types of models one can define, although the presented models…

Computation · Statistics 2025-04-28 Jimmy Huy Tran , Tore Selland Kleppe

Stochastic Galerkin methods offer unexplored potential for the numerical simulation of parabolic problems with random variables, in particular if they are combined with variational discretizations of the space and time variables. Due to the…

Numerical Analysis · Mathematics 2026-05-21 Moataz Dawor , Nils Margenberg , Markus Bause

In this work we propose a Hybrid method with Deviational Particles (HDP) for a plasma modeled by the inhomogeneous Vlasov-Poisson-Landau system. We split the distribution into a Maxwellian part evolved by a grid based fluid solver and a…

Numerical Analysis · Mathematics 2016-02-17 Bokai Yan

The multi-scale flow mechanism is crucial for force and heat loaded on near-space and reentry vehicles, the control of spacecraft by thrusters, the propelling and cooling of MEMS, etc. Since the continuum flow and rarefied flow often exist…

Computational Physics · Physics 2021-07-28 Sirui Yang , Sha Liu , Chengwen Zhong , Junzhe Cao , Congshan Zhuo

We present a study of single-mode Rayleigh-Taylor instabilities (smRTI) with a modified Direct Simulation Monte Carlo (mDSMC) code in two dimensions. The mDSMC code is aimed to capture the dynamics of matter for a large range of Knudsen…

Fluid Dynamics · Physics 2016-11-15 Irina Sagert , Jim Howell , Alec Staber , Terrance Strother , Dirk Colbry , Wolfgang Bauer

The use of stochastic models, in effect piecewise deterministic Markov processes (PDMP), has become increasingly popular especially for the modeling of chemical reactions and cell biophysics. Yet, exact simulation methods, for the…

Numerical Analysis · Mathematics 2015-04-28 Romain Veltz

In the context of the validation of PICLas, a kinetic particle suite for the simulation of rarefied, non-equilibrium plasma flows, the biased hypersonic nitrogen flow around a blunted cone was simulated with the Direct Simulation Monte…

Computational Physics · Physics 2018-11-13 T. Binder , S. Copplestone , A. Mirza , P. Nizenkov , P. Ortwein , M. Pfeiffer , W. Reschke , C. -D. Munz , S. Fasoulas

Stochastic models are often used to help understand the behavior of intracellular biochemical processes. The most common such models are continuous time Markov chains (CTMCs). Parametric sensitivities, which are derivatives of expectations…

Numerical Analysis · Mathematics 2014-11-19 Elizabeth Skubak Wolf , David F. Anderson

In this paper the application of the multi-level Monte Carlo (MLMC) method on numerical simulations of turbulent flows with uncertain parameters is investigated. Several strategies for setting up the MLMC method are presented, and the…

Computation · Statistics 2016-08-22 Qingsha Chen , Ju Ming

Hamiltonian Flow Monte Carlo(HFMC) methods have been implemented in engineering, biology and chemistry. HFMC makes large gradient based steps to rapidly explore the state space. The application of the Hamiltonian dynamics allows to estimate…

Computation · Statistics 2017-09-06 Raphael Douady , Shohruh Miryusupov

The Bhatnagar-Gross-Krook (BGK) model as well as its extensions (ellipsoidal statistical BGK, Shakhov BGK, unified BGK) are used in particle-based fluid dynamics and compared with the Direct Simulation Monte Carlo (DSMC) method. To this…

Computational Physics · Physics 2018-10-11 M. Pfeiffer

We present a novel hybrid computational method to simulate accurately dendritic solidification in the low undercooling limit where the dendrite tip radius is one or more orders of magnitude smaller than the characteristic spatial scale of…

Materials Science · Physics 2009-10-31 Mathis Plapp , Alain Karma

Hybrid Monte Carlo (HMC) generates samples from a prescribed probability distribution in a configuration space by simulating Hamiltonian dynamics, followed by the Metropolis (-Hastings) acceptance/rejection step. Compressible HMC (CHMC)…

Computational Physics · Physics 2016-04-05 Akihiko Nishimura , David Dunson

Ab initio quantum Monte Carlo (QMC) is a stochastic approach for solving the many-body Schr\"odinger equation without resorting to one-body approximations. QMC algorithms are readily parallelizable via ensembles of $N_w$ walkers, making…

Chemical Physics · Physics 2025-08-19 Kousuke Nakano , Sandro Sorella , Michele Casula

Due to limited possibilities of experimental investigations for non-equilibrium gas flows, numerical results are of highest interest. Although the well-established Direct Simulation Monte Carlo (DSMC) method achieves highly accurate…

Computational Physics · Physics 2025-02-04 Franziska Hild , Marcel Pfeiffer

Kinetic equations model the position-velocity distribution of particles subject to transport and collision effects. Under a diffusive scaling, these combined effects converge to a diffusion equation for the position density in the limit of…

Numerical Analysis · Mathematics 2023-07-26 Emil Løvbak , Giovanni Samaey