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Self-supervised pretraining (SSP) has shown promising results in learning from large unlabeled datasets and, thus, could be useful for automated cardiovascular magnetic resonance (CMR) short-axis cine segmentation. However, inconsistent…

Computer Vision and Pattern Recognition · Computer Science 2024-09-27 Rob A. J. de Mooij , Josien P. W. Pluim , Cian M. Scannell

In the clinical routine, short axis (SA) cine cardiac MR (CMR) image stacks are acquired during multiple subsequent breath-holds. If the patient cannot consistently hold the breath at the same position, the acquired image stack will be…

Computer Vision and Pattern Recognition · Computer Science 2018-10-05 Giacomo Tarroni , Ozan Oktay , Matthew Sinclair , Wenjia Bai , Andreas Schuh , Hideaki Suzuki , Antonio de Marvao , Declan O'Regan , Stuart Cook , Daniel Rueckert

In this work we reduce undersampling artefacts in two-dimensional ($2D$) golden-angle radial cine cardiac MRI by applying a modified version of the U-net. We train the network on $2D$ spatio-temporal slices which are previously extracted…

Image and Video Processing · Electrical Eng. & Systems 2019-08-14 Andreas Kofler , Marc Dewey , Tobias Schaeffter , Christian Wald , Christoph Kolbitsch

Assessment of cardiovascular disease (CVD) with cine magnetic resonance imaging (MRI) has been used to non-invasively evaluate detailed cardiac structure and function. Accurate segmentation of cardiac structures from cine MRI is a crucial…

Image and Video Processing · Electrical Eng. & Systems 2021-07-23 Xiaofeng Liu , Fangxu Xing , Hanna K. Gaggin , Weichung Wang , C. -C. Jay Kuo , Georges El Fakhri , Jonghye Woo

The reconstruction of 3D cine-MRI is challenged by highly undersampled k-space data in each cine frame, due to the slow speed of MR signal acquisition. We proposed a machine learning-based framework, spatial and temporal implicit neural…

Medical Physics · Physics 2023-08-22 Hua-Chieh Shao , Tielige Mengke , Jie Deng , You Zhang

Quantification of cardiac biomarkers from cine cardiovascular magnetic resonance (CMR) data using deep learning (DL) methods offers many advantages, such as increased accuracy and faster analysis. However, only a few studies have focused on…

Quantitative Methods · Quantitative Biology 2024-08-22 Dewmini Hasara Wickremasinghe , Yiyang Xu , Esther Puyol-Antón , Paul Aljabar , Reza Razavi , Andrew P. King

Cardiac magnetic resonance imaging improves on diagnosis of cardiovascular diseases by providing images at high spatiotemporal resolution. Manual evaluation of these time-series, however, is expensive and prone to biased and…

Computer Vision and Pattern Recognition · Computer Science 2018-04-06 Fabian Isensee , Paul Jaeger , Peter M. Full , Ivo Wolf , Sandy Engelhardt , Klaus H. Maier-Hein

Cardiac Magnetic Resonance (CMR) imaging serves as the gold-standard for evaluating cardiac morphology and function. Typically, a multi-view CMR stack, covering short-axis (SA) and 2/3/4-chamber long-axis (LA) views, is acquired for a…

Image and Video Processing · Electrical Eng. & Systems 2025-07-03 Yundi Zhang , Chen Chen , Suprosanna Shit , Sophie Starck , Daniel Rueckert , Jiazhen Pan

Accurate and reproducible measurements of the aortic diameters are crucial for the diagnosis of cardiovascular diseases and for therapeutic decision making. Currently, these measurements are manually performed by healthcare professionals,…

Image and Video Processing · Electrical Eng. & Systems 2020-09-11 Axel Aguerreberry , Ezequiel de la Rosa , Alain Lalande , Elmer Fernandez

Purpose: To introduce a novel deep learning based approach for fast and high-quality dynamic multi-coil MR reconstruction by learning a complementary time-frequency domain network that exploits spatio-temporal correlations simultaneously…

Image and Video Processing · Electrical Eng. & Systems 2021-06-21 Chen Qin , Jinming Duan , Kerstin Hammernik , Jo Schlemper , Thomas Küstner , René Botnar , Claudia Prieto , Anthony N. Price , Joseph V. Hajnal , Daniel Rueckert

PURPOSE: Real-time assessment of ventricular volumes requires high acceleration factors. Residual convolutional neural networks (CNN) have shown potential for removing artifacts caused by data undersampling. In this study we investigated…

Computer Vision and Pattern Recognition · Computer Science 2020-09-07 Andreas Hauptmann , Simon Arridge , Felix Lucka , Vivek Muthurangu , Jennifer A. Steeden

Cardiac magnetic resonance (CMR) images play a growing role in the diagnostic imaging of cardiovascular diseases. Full coverage of the left ventricle (LV), from base to apex, is a basic criterion for CMR image quality and necessary for…

Computer Vision and Pattern Recognition · Computer Science 2018-11-09 Le Zhang , Ali Gooya , Marco Pereanez , Bo Dong , Stefan K. Piechnik , Stefan Neubauer , Steffen E. Petersen , Alejandro F. Frangi

Automatic and accurate whole-heart and great vessel segmentation from 3D cardiac magnetic resonance (MR) images plays an important role in the computer-assisted diagnosis and treatment of cardiovascular disease. However, this task is very…

Computer Vision and Pattern Recognition · Computer Science 2017-08-03 Lequan Yu , Jie-Zhi Cheng , Qi Dou , Xin Yang , Hao Chen , Jing Qin , Pheng-Ann Heng

Recovering the 3D motion of the heart from cine cardiac magnetic resonance (CMR) imaging enables the assessment of regional myocardial function and is important for understanding and analyzing cardiovascular disease. However, 3D cardiac…

Image and Video Processing · Electrical Eng. & Systems 2022-08-02 Qingjie Meng , Chen Qin , Wenjia Bai , Tianrui Liu , Antonio de Marvao , Declan P O'Regan , Daniel Rueckert

We propose a method for synthesizing cardiac magnetic resonance (MR) images with plausible heart pathologies and realistic appearances for the purpose of generating labeled data for the application of supervised deep-learning (DL) training.…

Image and Video Processing · Electrical Eng. & Systems 2023-05-31 Sina Amirrajab , Cristian Lorenz , Juergen Weese , Josien Pluim , Marcel Breeuwer

Artificial intelligence (AI) techniques have been proposed for automating analysis of short axis (SAX) cine cardiac magnetic resonance (CMR), but no CMR analysis tool exists to automatically analyse large (unstructured) clinical CMR…

Current cardiac cine magnetic resonance image (cMR) studies focus on the end diastole (ED) and end systole (ES) phases, while ignoring the abundant temporal information in the whole image sequence. This is because whole sequence…

Computer Vision and Pattern Recognition · Computer Science 2024-11-04 Meng Ye , Bingyu Xin , Leon Axel , Dimitris Metaxas

Real-time cardiac cine MRI does not require ECG gating in the data acquisition and is more useful for patients who can not hold their breaths or have abnormal heart rhythms. However, to achieve fast image acquisition, real-time cine…

Image and Video Processing · Electrical Eng. & Systems 2020-08-21 Eric Z. Chen , Xiao Chen , Jingyuan Lyu , Yuan Zheng , Terrence Chen , Jian Xu , Shanhui Sun

Temporal patterns of cardiac motion provide important information for cardiac disease diagnosis. This pattern could be obtained by three-directional CINE multi-slice left ventricular myocardial velocity mapping (3Dir MVM), which is a…

Image and Video Processing · Electrical Eng. & Systems 2021-11-02 Xiaodan Xing , Yinzhe Wu , David Firmin , Peter Gatehouse , Guang Yang

Computational fluid dynamics (CFD) can be used for evaluation of hemodynamics. However, its routine use is limited by labor-intensive manual segmentation, CFD mesh creation, and time-consuming simulation. This study aims to train a deep…

Computer Vision and Pattern Recognition · Computer Science 2025-02-18 Tina Yao , Endrit Pajaziti , Michael Quail , Silvia Schievano , Jennifer A Steeden , Vivek Muthurangu