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Non-Markovian effects in the evolution of open quantum systems have recently attracted widespread interest, particularly in the context of assessing the efficiency of energy and charge transfer in nanoscale biomolecular networks and quantum…

Chemical Physics · Physics 2016-02-10 S. Oviedo-Casado , J. Prior , A. W. Chin , R. Rosenbach , S. F. Huelga , M. B. Plenio

Recently, plenty research has been done on discovering the role of energy dissipation in biological networks, most of which focus on the relationship of dissipation and functionality. However, the development of networks science urged us to…

Biological Physics · Physics 2026-05-20 Bowen Shi , Long Qian , Qi Ouyang

We propose a model of multispecies populations surviving on distributed resources. System dynamics are investigated under changes in abiotic factors such as the climate, as parameterized through environmental temperature. In particular, we…

Populations and Evolution · Quantitative Biology 2017-10-25 I. Sudakov , S. A. Vakulenko , D. Kirievskaya , K. M. Golden

Dissipative phenomena manifest in multiple mechanical systems. In this dissertation, different geometric frameworks for modelling non-conservative dynamics are considered. The objective is to generalize several results from conservative…

Mathematical Physics · Physics 2024-09-19 Asier López-Gordón

We explore the connection between migration patterns and emergent behaviors of evolving populations in spatially heterogeneous environments. Despite extensive studies in ecologically and medically important systems, a unifying framework…

Populations and Evolution · Quantitative Biology 2024-01-10 Casey O. Barkan , Shenshen Wang

Biological evolution is a complex blend of ever changing structural stability, variability and emergence of new phenotypes, niches, ecosystems. We wish to argue that the evolution of life marks the end of a physics world view of law…

Other Quantitative Biology · Quantitative Biology 2012-01-11 Giuseppe Longo , Maël Montévil , Stuart Kauffman

Our planet is roughly closed to matter, but open to energy input from the sun. However, to harness this energy, organisms must transform matter from one chemical (redox) state to another. For example, photosynthetic organisms can capture…

Populations and Evolution · Quantitative Biology 2024-03-04 Akshit Goyal , Avi I. Flamholz , Alexander P. Petroff , Arvind Murugan

Living systems are open nonequilibrium systems that continuously exchange energy, matter, and information with their environments, leading to stochastic dynamics with memory and active fluctuations. In this study, we develop a non-Markovian…

Statistical Mechanics · Physics 2026-04-20 Feiyi Liu , Min Guo , Hongwei Tan , Yang Wang

Measurement in biological systems became a subject of concern as a consequence of numerous reports on limited reproducibility of experimental results. To reveal origins of this inconsistency, we have examined general features of biological…

Other Quantitative Biology · Quantitative Biology 2017-04-03 Dalibor Štys , Jan Urban , Renata Rychtáriková , Anna Zhyrova , Petr Císař

Rigidity is an emergent property of materials - it is not a feature of individual components that comprise the structure, but instead arises from interactions between many constituent parts. Recently, it has been recognized that…

Soft Condensed Matter · Physics 2025-08-27 Kelly Aspinwall , Tyler Hain , M. Lisa Manning

Urban growth sometimes leads to rigid infrastructure that struggles to adapt to changing demand. This paper introduces a novel approach, aiming to enable cities to evolve and respond more effectively to such dynamic demand. It identifies…

Computers and Society · Computer Science 2023-11-28 Xi Chen , Wei Hu , Jingru Yu , Ding Wang , Shengyue Yao , Yilun Lin , Fei-Yue Wang

Societies experience politically stable and unstable phases along history, whereas political power is usually passed to new elite groups by these changes. Structural dynamics of the elites in a society have been proposed to be one of the…

Physics and Society · Physics 2025-11-24 Alexander Jochim , Stefan Bornholdt

Highly-diverse ecosystems exhibit a broad distribution of population sizes and species turnover, where species at high and low abundances are exchanged over time. We show that these two features generically emerge in the fluctuating phase…

Populations and Evolution · Quantitative Biology 2024-01-09 Thibaut Arnoulx de Pirey , Guy Bunin

Understanding computational capabilities of simple biological circuits, such as the regulatory circuits of single-cell organisms, remains an active area of research. Recent theoretical work has shown that a simple regulatory architecture…

Biological Physics · Physics 2022-11-24 Fang Yu , Mikhail Tikhonov

A central goal of evolutionary biology is to explain the origins and distribution of diversity across life. Beyond species or genetic diversity, we also observe diversity in the circuits (genetic or otherwise) underlying complex functional…

Populations and Evolution · Quantitative Biology 2018-06-06 Ali Tehrani-Saleh , Thomas LaBar , Christoph Adami

Like all natural systems, great societies and their cultures emerge by a growth process from their environments, developing, organized, and behaving as wholes with their internal designs linked with their external worlds. So the general…

Physics and Society · Physics 2022-08-16 Jessie Henshaw

Genetic information and environmental factors determine the path of an individuals life and therefore, the evolution of its entire species. We have succeeded in proposing and studying a model that captures this idea. In our model, a…

Populations and Evolution · Quantitative Biology 2021-07-28 N. Abadi , G. Abramson

Hydropower plants play a pivotal role in advancing clean and sustainable energy production, contributing significantly to the global transition towards renewable energy sources. However, hydropower plants are currently perceived both…

Machine Learning · Computer Science 2024-04-05 C. Coelho , M. Jing , M. Fernanda P. Costa , L. L. Ferrás

Nonlinear dynamical systems may be exposed to tipping points, critical thresholds at which small changes in the external inputs or in the systems parameters abruptly shift the system to an alternative state with a contrasting dynamical…

Chaotic Dynamics · Physics 2016-10-07 Everton S. Medeiros , Iberê L. Caldas , Murilo S. Baptista , Ulrike Feudel

Life is fundamentally a scientific enigma. The interplay between chaos, entropy dynamics, and Prigogine's dissipative systems offers profound insights into the emergence, stabilization, and eventual collapse of far-from-equilibrium systems.…

Subcellular Processes · Quantitative Biology 2025-02-20 Salvatore Chirumbolo , Antonio Vella
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