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Software verification has emerged as a key concern for ensuring the continued progress of information technology. Full verification generally requires, as a crucial step, equipping each loop with a "loop invariant". Beyond their role in…

Software Engineering · Computer Science 2014-01-14 Carlo A. Furia , Bertrand Meyer , Sergey Velder

As applications of large language models (LLMs) become increasingly complex, the demand for robust complex instruction following capabilities is growing accordingly. We argue that a thorough understanding of the instruction itself,…

Computation and Language · Computer Science 2026-04-21 Yuancheng Yang , Lin Yang , Xu Wang , Chao Tong , Haihua Yang

Molecular simulations are an important tool for research in physics, chemistry, and biology. The capabilities of simulations can be greatly expanded by providing access to advanced sampling methods and techniques that permit calculation of…

Language models can behave in unexpected and unsafe ways, and so it is valuable to monitor their outputs. Internal activations of language models encode additional information that could be useful for this. The baseline approach for…

Machine Learning · Computer Science 2025-04-30 Henk Tillman , Dan Mossing

This paper applies a deep convolutional/highway MLP framework to classify genomic sequences on the transcription factor binding site task. To make the model understandable, we propose an optimization driven strategy to extract "motifs", or…

Machine Learning · Computer Science 2016-06-03 Jack Lanchantin , Ritambhara Singh , Zeming Lin , Yanjun Qi

Agentic workflows, where multiple AI agents collaborate to accomplish complex tasks like reasoning or planning, play a substantial role in many cutting-edge commercial applications, and continue to fascinate researchers across fields for…

Computation and Language · Computer Science 2025-11-10 Deepak Pandita , Tharindu Cyril Weerasooriya , Ankit Parag Shah , Isabelle Diana May-Xin Ng , Christopher M. Homan , Wei Wei

Molecular dynamics (MD) simulations provide atomistic insights into the structure, dynamics, and function of biomolecules by generating time-resolved, high-dimensional trajectories. Analyzing such data benefits from estimating the minimal…

Biomolecules · Quantitative Biology 2026-03-02 Irene Cazzaniga , Toni Giorgino

Determining mechanistic models of gene regulation, especially underlying phenotypic variation, is a central goal of both mathematical biology and modern evolutionary biology. However, several challenges, involving both common…

Molecular Networks · Quantitative Biology 2025-11-04 Cody E. FitzGerald , Shelley Reich , Victor Agaba , Arjun Mathur , Michael S. Werner , Niall M. Mangan

Multimodal Sentiment Analysis (MSA) leverages multiple data modals to analyze human sentiment. Existing MSA models generally employ cutting-edge multimodal fusion and representation learning-based methods to promote MSA capability. However,…

Computation and Language · Computer Science 2024-12-04 Yijie Jin

Compiler technologies in deep learning and domain-specific hardware acceleration are increasingly adopting extensible compiler frameworks such as Multi-Level Intermediate Representation (MLIR) to facilitate more efficient development. With…

Software Engineering · Computer Science 2024-08-28 Ben Limpanukorn , Jiyuan Wang , Hong Jin Kang , Eric Zitong Zhou , Miryung Kim

Video inbetweening creates smooth and natural transitions between two image frames, making it an indispensable tool for video editing and long-form video synthesis. Existing works in this domain are unable to generate large, complex, or…

Computer Vision and Pattern Recognition · Computer Science 2025-10-14 Maham Tanveer , Yang Zhou , Simon Niklaus , Ali Mahdavi Amiri , Hao Zhang , Krishna Kumar Singh , Nanxuan Zhao

Inferring causal relations in timeseries data with delayed effects is a fundamental challenge, especially when the underlying system exhibits complex dynamics that cannot be captured by simple functional mappings. Traditional approaches…

Machine Learning · Computer Science 2026-02-23 Preetom Biswas , Giulia Pedrielli , K. Selçuk Candan

Text-to-image synthesis has made remarkable progress, yet accurately interpreting complex and lengthy prompts remains challenging, often resulting in semantic inconsistencies and missing details. Existing solutions, such as fine-tuning, are…

Computer Vision and Pattern Recognition · Computer Science 2025-10-09 Wen Ye , Zhaocheng Liu , Yuwei Gui , Tingyu Yuan , Yunyue Su , Bowen Fang , Chaoyang Zhao , Qiang Liu , Liang Wang

Reasoning models produce long traces of intermediate decisions and tool calls, making test-time verification important for ensuring correctness. Existing approaches either verify only the final answer, which misses early errors, or rely on…

New and upgraded radio interferometers produce data at massive rates and will require significant improvements in analysis techniques to reach their promised levels of performance in a routine manner. Until these techniques are fully…

Instrumentation and Methods for Astrophysics · Physics 2012-06-29 Peter K. G. Williams , Casey J. Law , Geoffrey C. Bower

Test optimization contains test case selection and minimization, which is an important challenge in software testing and has been addressed with search-based approaches intensively in the past. Inspired by the recent advancement of using…

Software Engineering · Computer Science 2026-04-14 Yige Yang , Man Zhang , Tao Yue

Simulations are valuable tools for empirically evaluating the properties of statistical methods and are primarily employed in methodological research to draw general conclusions about methods. In addition, they can often be useful to…

Other Statistics · Statistics 2025-10-08 Anne-Laure Boulesteix , Patrick Callahan , Luzia Hanssum , Vincent Gaertner , Eva Hoster

Rule-based models are often used for data analysis as they combine interpretability with predictive power. We present RuleKit, a versatile tool for rule learning. Based on a sequential covering induction algorithm, it is suitable for…

Machine Learning · Computer Science 2020-01-28 Adam Gudyś , Marek Sikora , Łukasz Wróbel

The security of microcontrollers, which drive modern IoT and embedded devices, continues to raise major concerns. Within a microcontroller (MCU), the firmware is a monolithic piece of software that contains the whole software stack, whereas…

Cryptography and Security · Computer Science 2023-12-05 Bo Feng , Meng Luo , Changming Liu , Long Lu , Engin Kirda

Scalable and automatic formal verification for concurrent systems is always demanding. In this paper, we propose a verification framework to support automated compositional reasoning for concurrent programs with shared variables. Our…

Formal Languages and Automata Theory · Computer Science 2018-03-28 Fuyuan Zhang , Yongwang Zhao , David Sanan , Yang Liu , Alwen Tiu , Shang-Wei Lin , Jun Sun
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