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Stain variation is a phenomenon observed when distinct pathology laboratories stain tissue slides that exhibit similar but not identical color appearance. Due to this color shift between laboratories, convolutional neural networks (CNNs)…

Computer Vision and Pattern Recognition · Computer Science 2020-04-16 David Tellez , Geert Litjens , Peter Bandi , Wouter Bulten , John-Melle Bokhorst , Francesco Ciompi , Jeroen van der Laak

Oral cancer is a global health challenge. It is treatable if detected early, but it is often fatal in late stages. There is a shift from the invasive and time-consuming tissue sampling and histological examination, toward non-invasive brush…

Image and Video Processing · Electrical Eng. & Systems 2024-10-30 Wenyi Lian , Joakim Lindblad , Christina Runow Stark , Jan-Michaél Hirsch , Nataša Sladoje

Cytology is a low-cost and non-invasive diagnostic procedure employed to support the diagnosis of a broad range of pathologies. Computer Vision technologies, by automatically generating quantitative and objective descriptions of…

In this paper, we develop a complete pipeline for stain normalization, segmentation, and classification of nuclei in hematoxylin and eosin (H&E) stained breast cancer histopathology images. In the first step, we use a CNN-based stain…

Computer Vision and Pattern Recognition · Computer Science 2018-11-12 Edwin Yuan , Junkyo Suh

Digitized Histological diagnosis is in increasing demand. However, color variations due to various factors are imposing obstacles to the diagnosis process. The problem of stain color variations is a well-defined problem with many proposed…

Computer Vision and Pattern Recognition · Computer Science 2018-04-06 M Tarek Shaban , Christoph Baur , Nassir Navab , Shadi Albarqouni

Staining is essential in cell imaging and medical diagnostics but poses significant challenges, including high cost, time consumption, labor intensity, and irreversible tissue alterations. Recent advances in deep learning have enabled…

Computer Vision and Pattern Recognition · Computer Science 2025-04-15 Ziwang Xu , Lanqing Guo , Satoshi Tsutsui , Shuyan Zhang , Alex C. Kot , Bihan Wen

The integrity of the reconstructed human epidermis generated in vitro could be assessed using histological analyses combined with immunohistochemical staining of keratinocyte differentiation markers. Computer-based analysis of scanned…

Image and Video Processing · Electrical Eng. & Systems 2025-12-01 Dawid Zamojski , Agnieszka Gogler , Dorota Scieglinska , Michal Marczyk

Color image denoising is frequently encountered in various image processing and computer vision tasks. One traditional strategy is to convert the RGB image to a less correlated color space and denoise each channel of the new space…

Computer Vision and Pattern Recognition · Computer Science 2022-09-20 Yiwen Shan , Dong Hu , Zhi Wang , Tao Jia

Vibrational micro-spectroscopy is a powerful optical tool, providing a non-invasive label-free chemically specific imaging for many chemical and biomedical applications. However, hyperspectral image produced by Raman micro-spectroscopy…

Computational Physics · Physics 2019-03-12 E. G. Lobanova , S. V. Lobanov

Histopathological cancer diagnosis is based on visual examination of stained tissue slides. Hematoxylin and eosin (H\&E) is a standard stain routinely employed worldwide. It is easy to acquire and cost effective, but cells and tissue…

Computer Vision and Pattern Recognition · Computer Science 2022-07-12 Zhaoyang Xu , Xingru Huang , Carlos Fernández Moro , Béla Bozóky , Qianni Zhang

Screening Papanicolaou test samples has proven to be highly effective in reducing cervical cancer-related mortality. However, the lack of trained cytopathologists hinders its widespread implementation in low-resource settings. Deep…

Image and Video Processing · Electrical Eng. & Systems 2023-06-08 Thomas Stegmüller , Christian Abbet , Behzad Bozorgtabar , Holly Clarke , Patrick Petignat , Pierre Vassilakos , Jean-Philippe Thiran

The diagnosis of cancer is mainly performed by visual analysis of the pathologists, through examining the morphology of the tissue slices and the spatial arrangement of the cells. If the microscopic image of a specimen is not stained, it…

Image and Video Processing · Electrical Eng. & Systems 2020-02-06 Pegah Salehi , Abdolah Chalechale

Cytology screening from Papanicolaou (Pap) smears is a common and effective tool for the preventive clinical management of cervical cancer, where abnormal cell detection from whole slide images serves as the foundation for reporting…

Computer Vision and Pattern Recognition · Computer Science 2024-09-24 Hao Jiang , Runsheng Liu , Yanning Zhou , Huangjing Lin , Hao Chen

Digital whole-slide images of pathological tissue samples have recently become feasible for use within routine diagnostic practice. These gigapixel sized images enable pathologists to perform reviews using computer workstations instead of…

Human-Computer Interaction · Computer Science 2016-10-14 Jesper Molin , Anna Bodén , Darren Treanor , Morten Fjeld , Claes Lundström

Computer assisted diagnosis in digital pathology is becoming ubiquitous as it can provide more efficient and objective healthcare diagnostics. Recent advances have shown that the convolutional Neural Network (CNN) architectures, a…

Image and Video Processing · Electrical Eng. & Systems 2022-01-05 Sruthi Krishna , Suganthi S. S , Shivsubramani Krishnamoorthy , Arnav Bhavsar

Normalizing unwanted color variations due to differences in staining processes and scanner responses has been shown to aid machine learning in computational pathology. Of the several popular techniques for color normalization, structure…

Computer Vision and Pattern Recognition · Computer Science 2019-01-11 Goutham Ramakrishnan , Deepak Anand , Amit Sethi

Providing an improved technique which can assist pathologists in correctly classifying meningioma tumours with a significant accuracy is our main objective. The proposed technique, which is based on optimum texture measure combination,…

Computer Vision and Pattern Recognition · Computer Science 2015-12-29 Omar S. Al-Kadi

Liquid-based cytology (LBC) is a reliable automated technique for the screening of Papanicolaou (Pap) smear data. It is an effective technique for collecting a majority of the cervical cells and aiding cytopathologists in locating abnormal…

Image and Video Processing · Electrical Eng. & Systems 2020-05-01 Sudhir Sornapudi , G. T. Brown , Zhiyun Xue , Rodney Long , Lisa Allen , Sameer Antani

Generalization is one of the main challenges of computational pathology. Slide preparation heterogeneity and the diversity of scanners lead to poor model performance when used on data from medical centers not seen during training. In order…

Image and Video Processing · Electrical Eng. & Systems 2024-01-09 Nicolas Nerrienet , Rémy Peyret , Marie Sockeel , Stéphane Sockeel

In this paper, we propose a novel unsupervised color constancy method, called Probabilistic Color Constancy (PCC). We define a framework for estimating the illumination of a scene by weighting the contribution of different image regions…

Computer Vision and Pattern Recognition · Computer Science 2020-12-24 Firas Laakom , Jenni Raitoharju , Alexandros Iosifidis , Uygar Tuna , Jarno Nikkanen , Moncef Gabbouj
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