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This paper introduces reproducible research, and explains its importance, benefits and challenges. Some important tools for conducting reproducible research in Transportation Research are also introduced. Moreover, the source code for…

Digital Libraries · Computer Science 2021-05-17 Zuduo Zheng

Computational methods have reshaped the landscape of modern biology. While the biomedical community is increasingly dependent on computational tools, the mechanisms ensuring open data, open software, and reproducibility are variably…

Other Quantitative Biology · Quantitative Biology 2020-07-28 Jaqueline J. Brito , Jun Li , Jason H. Moore , Casey S. Greene , Nicole A. Nogoy , Lana X. Garmire , Serghei Mangul

This paper investigates the reproducibility of computational science research and identifies key challenges facing the community today. It is the result of the First Summer School on Experimental Methodology in Computational Science…

Research reproducibility - i.e., rerunning analyses on original data to replicate the results - is paramount for guaranteeing scientific validity. However, reproducibility is often very challenging, especially in research fields where…

Human-Computer Interaction · Computer Science 2023-09-06 Micol Spitale , Rebecca Stower , Elmira Yadollahi , Maria Teresa Parreira , Nida Itrat Abbasi , Iolanda Leite , Hatice Gunes

With ever-increasing computational capabilities, robust and automated research workflows have become essential for orchestrating large numbers of interdependent simulations. However, significant technical expertise is still required to…

Computational reproducibility is central to scientific credibility, yet verifying published results at scale remains costly. We develop an AI-assisted workflow for automated full-paper replication -- retrieving materials, reconstructing…

Econometrics · Economics 2026-03-27 Yiqing Xu , Leo Yang Yang

We present ReproducedPapers.org: an open online repository for teaching and structuring machine learning reproducibility. We evaluate doing a reproduction project among students and the added value of an online reproduction repository among…

Reproducibility is one of the core dimensions that concur to deliver Trustworthy Artificial Intelligence. Broadly speaking, reproducibility can be defined as the possibility to reproduce the same or a similar experiment or method, thereby…

Artificial Intelligence · Computer Science 2023-02-27 Riccardo Albertoni , Sara Colantonio , Piotr Skrzypczyński , Jerzy Stefanowski

Reproducibility is a fundamental requirement of the scientific process since it enables outcomes to be replicated and verified. Computational scientific experiments can benefit from improved reproducibility for many reasons, including…

Databases · Computer Science 2019-09-04 Maria Luiza Mondelli , A. Townsend Peterson , Luiz M. R. Gadelha

A recent study showed that more than 70% of researchers fail to reproduce their peers's experiments and more than half fail to reproduce their own experiments. Obviously, from a perspective of scientific quality this is a more than…

Human-Computer Interaction · Computer Science 2021-03-18 Andrew Tristan , Vinicius Woloszyn , Ben Kaden

Automatic program synthesis is a long-lasting dream in software engineering. Recently, a promising Deep Learning (DL) based solution, called Copilot, has been proposed by OpenAI and Microsoft as an industrial product. Although some studies…

Software Engineering · Computer Science 2023-04-18 Arghavan Moradi Dakhel , Vahid Majdinasab , Amin Nikanjam , Foutse Khomh , Michel C. Desmarais , Zhen Ming , Jiang

Computational reproducibility is a growing problem that has been extensively studied among computational researchers and within the signal processing and machine learning research community. However, with the changing landscape of signal…

Signal Processing · Electrical Eng. & Systems 2022-02-16 Joseph Shenouda , Waheed U. Bajwa

Reproducibility is a crucial aspect of scientific research that involves the ability to independently replicate experimental results by analysing the same data or repeating the same experiment. Over the years, many works have been proposed…

Digital Libraries · Computer Science 2024-07-16 Andrea Bianchi , Giordano d'Aloisio , Francesca Marzi , Antinisca Di Marco

As generative AI (GAI) tools become increasingly integrated into workplace environments, it is essential to measure their impact on productivity across specific domains. This study evaluates the effects of Microsoft's Security Copilot…

General Economics · Economics 2024-11-13 James Bono , Alec Xu

GeoAI has emerged as an exciting interdisciplinary research area that combines spatial theories and data with cutting-edge AI models to address geospatial problems in a novel, data-driven manner. While GeoAI research has flourished in the…

Computer Vision and Pattern Recognition · Computer Science 2024-04-23 Wenwen Li , Chia-Yu Hsu , Sizhe Wang , Peter Kedron

More than ninety percent of published Jupyter notebooks do not state dependencies on external packages. This makes them non-executable and thus hinders reproducibility of scientific results. We present SnifferDog, an approach that 1)…

Software Engineering · Computer Science 2021-03-05 Jiawei Wang , Li Li , Andreas Zeller

Reproducibility of computationally-derived scientific discoveries should be a certainty. As the product of several person-years' worth of effort, results -- whether disseminated through academic journals, conferences or exploited through…

Computational Engineering, Finance, and Science · Computer Science 2015-06-17 Tom Crick , Benjamin A. Hall , Samin Ishtiaq

Motivation. Trust in generative AI programming assistants is a vital attitude that impacts how programmers use those programming assistants. Programmers that are over-trusting may be too reliant on their tools, leading to incorrect or…

Human-Computer Interaction · Computer Science 2025-09-17 Anshul Shah , Thomas Rexin , Elena Tomson , Leo Porter , William G. Griswold , Adalbert Gerald Soosai Raj

Computational notebooks are notoriously prone to reproducibility failures. By permitting out-of-order cell execution, notebooks accumulate hidden state and implicit dependencies that cause interactive executions to silently diverge from…

Programming Languages · Computer Science 2026-05-05 Stephen N. Freund , Emery D. Berger , Cormac Flanagan , Eunice Jun

Reproducing computational research is often assumed to be as simple as rerunning the original code with provided data. In practice, missing packages, fragile file paths, version conflicts, or incomplete logic frequently cause analyses to…

Software Engineering · Computer Science 2026-04-24 Syed Mehtab Hussain Shah , Frank Hopfgartner , Arnim Bleier