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Numerical methods that preserve geometric invariants of the system, such as energy, momentum or the symplectic form, are called geometric integrators. Variational integrators are an important class of geometric integrators. The general idea…

Systems and Control · Electrical Eng. & Systems 2022-02-04 Leonardo Colombo , Manuela Gamonal Fernández , David Martín de Diego

Symbolic encoding has been used in multi-operator learning as a way to embed additional information for distinct time-series data. For spatiotemporal systems described by time-dependent partial differential equations, the equation itself…

Machine Learning · Computer Science 2024-09-19 Derek Jollie , Jingmin Sun , Zecheng Zhang , Hayden Schaeffer

Interested in formalizing the generation of fast running code for linear algebra applications, the authors show how an index-free, calculational approach to matrix algebra can be developed by regarding matrices as morphisms of a category…

Software Engineering · Computer Science 2013-12-18 Hugo Daniel Macedo , José N. Oliveira

In a recent paper we have suggested that the finite temperature density matrix can be computed efficiently by a combination of polynomial expansion and iterative inversion techniques. We present here significant improvements over this…

Materials Science · Physics 2010-10-19 Michele Ceriotti , Thomas D. Kühne , Michele Parrinello

We report new statistical time-series analysis tools providing significant improvements in the rapid, precision extraction of discrete state dynamics from large databases of experimental observations of molecular machines. By building…

Quantitative Methods · Quantitative Biology 2019-10-23 Max A. Little , Bradley C. Steel , Fan Bai , Yoshiyuki Sowa , Thomas Bilyard , David M. Mueller , Richard M. Berry , Nick S. Jones

Generative models such as diffusion models, excel at capturing high-dimensional distributions with diverse input modalities, e.g. robot trajectories, but are less effective at multi-step constraint reasoning. Task and Motion Planning (TAMP)…

Operator splitting methods tailored to coupled linear port-Hamiltonian systems are developed. We present algorithms that are able to exploit scalar coupling, as well as multirate potential of these coupled systems. The obtained algorithms…

Numerical Analysis · Mathematics 2025-01-14 Jan Lorenz , Tom Zwerschke , Michael Günther , Kevin Schäfers

Discrete Hamiltonian variational integrators are derived from Type II and Type III generating functions for symplectic maps, and in this paper we establish a variational error analysis result that relates the order of accuracy of the…

Numerical Analysis · Mathematics 2016-09-09 Jeremy M. Schmitt , Melvin Leok

We present an implementation of interval analysis and mixed monotone interval reachability analysis as function transforms in Python, fully composable with the computational framework JAX. The resulting toolbox inherits several key features…

Systems and Control · Electrical Eng. & Systems 2024-05-02 Akash Harapanahalli , Saber Jafarpour , Samuel Coogan

We present MXtalTools, a flexible Python package for the data-driven modelling of molecular crystals, facilitating machine learning studies of the molecular solid state. MXtalTools comprises several classes of utilities: (1) synthesis,…

Machine Learning · Computer Science 2025-11-26 Michael Kilgour , Mark E. Tuckerman , Jutta Rogal

We propose a modification of the cost function of the Hopfield model whose salient features shine in its Taylor expansion and result in more than pairwise interactions with alternate signs, suggesting a unified framework for handling both…

Disordered Systems and Neural Networks · Physics 2018-01-08 Adriano Barra , Matteo Beccaria , Alberto Fachechi

This article summarizes new features and enhancements of the first major update of Package-X. Package-X 2.0 can now generate analytic expressions for arbitrarily high rank dimensionally regulated tensor integrals with up to four distinct…

High Energy Physics - Phenomenology · Physics 2017-05-18 Hiren H. Patel

This work presents a tensorial approach to constructing data-driven reduced-order models corresponding to semi-discrete partial differential equations with canonical Hamiltonian structure. By expressing parameter-varying operators with…

Numerical Analysis · Mathematics 2025-05-14 Arjun Vijaywargiya , Shane A. McQuarrie , Anthony Gruber

We present the Mathematica package $\texttt{MultiHypExp}$ that allows for the expansion of multivariate hypergeometric functions (MHFs), especially those likely to appear as solutions of multi-loop, multi-scale Feynman integrals, in the…

High Energy Physics - Theory · Physics 2024-01-15 Souvik Bera

This is the sixth part in a series of papers in which we introduce and develop a natural, general tensor category theory for suitable module categories for a vertex (operator) algebra. In this paper (Part VI), we construct the appropriate…

Quantum Algebra · Mathematics 2012-05-14 Yi-Zhi Huang , James Lepowsky , Lin Zhang

State sum constructions, such as Kuperberg's algorithm, give partition functions of physical systems, like lattice gauge theories, in various dimensions by associating local tensors or weights, to different parts of a closed triangulated…

We present a general, numerically motivated approach to the construction of symmetry adapted basis functions for solving ro-vibrational Schr\"{o}dinger equations. The approach is based on the property of the Hamiltonian operator to commute…

Atomic and Molecular Clusters · Physics 2017-08-25 Sergei N. Yurchenko , Andrey Yachmenev , Roman I. Ovsyannikov

We propose new primal-dual decomposition algorithms for solving systems of inclusions involving sums of linearly composed maximally monotone operators. The principal innovation in these algorithms is that they are block-iterative in the…

Optimization and Control · Mathematics 2015-11-30 Patrick L. Combettes , Jonathan Eckstein

A brief introduction of the technical approach to model FTUs as an aggregate of cells, whose state transition dynamics are mathematically represented as port-hamiltonians or Differential Algebraic equations is presented. A python library…

Tissues and Organs · Quantitative Biology 2024-06-18 Jagir R. Hussan

The demand for precision predictions in the field of high energy physics has dramatically increased over recent years. Experiments conducted at the LHC, as well as precision measurements at the intensity frontier such as Belle II require…

High Energy Physics - Phenomenology · Physics 2022-09-28 Marvin Gerlach , Florian Herren , Martin Lang
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