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Identifying biomarkers in medical images is vital for a wide range of biotech applications. However, recent Transformer and CNN based methods often struggle with variations in morphology and staining, which limits their feature extraction…

Image and Video Processing · Electrical Eng. & Systems 2025-04-09 Saad Wazir , Daeyoung Kim

We trained and applied an encoder-decoder model to semantically segment breast biopsy images into biologically meaningful tissue labels. Since conventional encoder-decoder networks cannot be applied directly on large biopsy images and the…

Computer Vision and Pattern Recognition · Computer Science 2017-10-12 Sachin Mehta , Ezgi Mercan , Jamen Bartlett , Donald Weaver , Joann Elmore , Linda Shapiro

Recently, deep learning methods have achieved state-of-the-art performance in many medical image segmentation tasks. Many of these are based on convolutional neural networks (CNNs). For such methods, the encoder is the key part for global…

Image and Video Processing · Electrical Eng. & Systems 2022-08-25 Hao Li , Dewei Hu , Han Liu , Jiacheng Wang , Ipek Oguz

Convolutional neural networks (CNNs) achieved the state-of-the-art performance in medical image segmentation due to their ability to extract highly complex feature representations. However, it is argued in recent studies that traditional…

Computer Vision and Pattern Recognition · Computer Science 2025-03-31 Zhendi Gong , Andrew P. French , Guoping Qiu , Xin Chen

Medical image segmentation faces challenges due to variations in anatomical structures. While convolutional neural networks (CNNs) effectively capture local features, they struggle with modeling long-range dependencies. Transformers…

Computer Vision and Pattern Recognition · Computer Science 2025-11-11 Lalit Maurya , Honghai Liu , Reyer Zwiggelaar

Deep learning has achieved remarkable success in medical image segmentation, often reaching expert-level accuracy in delineating tumors and tissues. However, most existing approaches remain task-specific, showing strong performance on…

Computer Vision and Pattern Recognition · Computer Science 2026-03-16 Fares Bougourzi , Fadi Dornaika , Abdenour Hadid

The Encoder-Decoder architecture is a main stream deep learning model for biomedical image segmentation. The encoder fully compresses the input and generates encoded features, and the decoder then produces dense predictions using encoded…

Computer Vision and Pattern Recognition · Computer Science 2019-01-16 Peixian Liang , Jianxu Chen , Hao Zheng , Lin Yang , Yizhe Zhang , Danny Z. Chen

Proper segmentation of organs-at-risk is important for radiation therapy, surgical planning, and diagnostic decision-making in medical image analysis. While deep learning-based segmentation architectures have made significant progress, they…

Computer Vision and Pattern Recognition · Computer Science 2025-09-23 Riad Hassan , M. Rubaiyat Hossain Mondal , Sheikh Iqbal Ahamed , Fahad Mostafa , Md Mostafijur Rahman

Surface crack segmentation poses a challenging computer vision task as background, shape, colour and size of cracks vary. In this work we propose optimized deep encoder-decoder methods consisting of a combination of techniques which yield…

Computer Vision and Pattern Recognition · Computer Science 2021-08-27 Jacob König , Mark Jenkins , Mike Mannion , Peter Barrie , Gordon Morison

U-Net is widely used in medical image segmentation due to its simple and flexible architecture design. To address the challenges of scale and complexity in medical tasks, several variants of U-Net have been proposed. In particular, methods…

Image and Video Processing · Electrical Eng. & Systems 2024-10-08 Weibin Yang , Zhiqi Dong , Mingyuan Xu , Longwei Xu , Dehua Geng , Yusong Li , Pengwei Wang

Medical image segmentation is crucial for the development of computer-aided diagnostic and therapeutic systems, but still faces numerous difficulties. In recent years, the commonly used encoder-decoder architecture based on CNNs has been…

Computer Vision and Pattern Recognition · Computer Science 2023-04-25 Davoud Saadati , Omid Nejati Manzari , Sattar Mirzakuchaki

Transformer, which can benefit from global (long-range) information modeling using self-attention mechanisms, has been successful in natural language processing and 2D image classification recently. However, both local and global features…

Computer Vision and Pattern Recognition · Computer Science 2021-06-29 Wenxuan Wang , Chen Chen , Meng Ding , Jiangyun Li , Hong Yu , Sen Zha

Transformer-based neural networks have surpassed promising performance on many biomedical image segmentation tasks due to a better global information modeling from the self-attention mechanism. However, most methods are still designed for…

Computer Vision and Pattern Recognition · Computer Science 2023-02-02 Zheyuan Zhang , Ulas Bagci

Segmentation is one of the most significant steps in image processing. Segmenting an image is a technique that makes it possible to separate a digital image into various areas based on the different characteristics of pixels in the image.…

Image and Video Processing · Electrical Eng. & Systems 2024-11-20 Sina Derakhshandeh , Ali Mahloojifar

Medical image segmentation plays a crucial role in clinical diagnosis and treatment planning, where accurate boundary delineation is essential for precise lesion localization, organ identification, and quantitative assessment. In recent…

Image and Video Processing · Electrical Eng. & Systems 2026-05-26 Peiting Tian , Xi Chen , Haixia Bi , Fan Li

Medical image segmentation plays an essential role in developing computer-assisted diagnosis and therapy systems, yet still faces many challenges. In the past few years, the popular encoder-decoder architectures based on CNNs (e.g., U-Net)…

Computer Vision and Pattern Recognition · Computer Science 2021-07-20 Guoping Xu , Xingrong Wu , Xuan Zhang , Xinwei He

While computer vision has proven valuable for medical image segmentation, its application faces challenges such as limited dataset sizes and the complexity of effectively leveraging unlabeled images. To address these challenges, we present…

Image and Video Processing · Electrical Eng. & Systems 2024-07-15 Zhaoshan Liua , Qiujie Lv , Chau Hung Lee , Lei Shen

Automatic segmentation of brain glioma from multimodal MRI scans plays a key role in clinical trials and practice. Unfortunately, manual segmentation is very challenging, time-consuming, costly, and often inaccurate despite human expertise…

Image and Video Processing · Electrical Eng. & Systems 2020-12-08 Minh H. Vu , Tufve Nyholm , Tommy Löfstedt

Understanding the morphological structure of medical images and precisely segmenting the region of interest or abnormality is an important task that can assist in diagnosis. However, the unique properties of medical imaging make clear…

Computer Vision and Pattern Recognition · Computer Science 2024-09-04 Sungmin Kang , Jaeha Song , Jihie Kim

Medical image segmentation is a fundamental task in the community of medical image analysis. In this paper, a novel network architecture, referred to as Convolution, Transformer, and Operator (CTO), is proposed. CTO employs a combination of…

Computer Vision and Pattern Recognition · Computer Science 2023-05-02 Yi Lin , Dong Zhang , Xiao Fang , Yufan Chen , Kwang-Ting Cheng , Hao Chen
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