Related papers: Neural Polar Decoders for DNA Data Storage
This paper investigates decoder diversity architectures for short low-density parity-check (LDPC) codes, based on recurrent neural network (RNN) models of the belief-propagation (BP) algorithm. We propose a new approach to achieve decoder…
In this work, we present a family of architectures for polar decoders using a reduced-complexity successive-cancellation decoding algorithm that employs unrolling to achieve extremely high throughput values while retaining moderate…
Polar codes are introduced for discrete memoryless broadcast channels. For $m$-user deterministic broadcast channels, polarization is applied to map uniformly random message bits from $m$ independent messages to one codeword while…
Transformer-based NLP models are powerful but have high computational costs that limit deployment. Finetuned encoder-decoder models are popular in specialized domains and can outperform larger more generalized decoder-only models, such as…
DNA has been discussed as a potential medium for data storage. Potentially it could be denser, could consume less energy, and could be more durable than conventional storage media such as hard drives, solid-state storage, and optical media.…
New algorithms for efficient decoding of polar codes (which may be CRC-augmented), transmitted over either a binary erasure channel (BEC) or an additive white Gaussian noise channel (AWGNC), are presented. We start by presenting a new…
Owing to its several merits over other DNA sequencing technologies, nanopore sequencers hold an immense potential to revolutionize the efficiency of DNA storage systems. However, their higher error rates necessitate further research to…
DeepTensor is a computationally efficient framework for low-rank decomposition of matrices and tensors using deep generative networks. We decompose a tensor as the product of low-rank tensor factors (e.g., a matrix as the outer product of…
Long polar codes can achieve the capacity of arbitrary binary-input discrete memoryless channels under a low complexity successive cancelation (SC) decoding algorithm. But for polar codes with short and moderate code length, the decoding…
In the standard polar code construction, the message vector $(U_0,U_1,\dots,U_{n-1})$ is divided into information bits and frozen bits according to the reliability of each $U_i$ given $(U_0,U_1,\dots,U_{i-1})$ and all the channel outputs.…
Nanopore sequencing is an emerging new technology for sequencing DNA, which can read long fragments of DNA (~50,000 bases) in contrast to most current short-read sequencing technologies which can only read hundreds of bases. While nanopore…
In [1], the authors proposed a new model of DNA storage system that integrates all three steps of retrieval and introduced the concept of DNA-correcting codes, which guarantees that the output of the storage system can be decoded to the…
In this paper, we design a deep learning-based convolutional autoencoder for channel coding and modulation. The objective is to develop an adaptive scheme capable of operating at various signal-to-noise ratios (SNR)s without the need for…
Ever since deoxyribonucleic acid (DNA) was considered as a next-generation data-storage medium, lots of research efforts have been made to correct errors occurred during the synthesis, storage, and sequencing processes using error…
Computed tomography is widely used as an imaging tool to visualize three-dimensional structures with expressive bone-soft tissue contrast. However, CT resolution and radiation dose are tightly entangled, highlighting the importance of…
In coding theory, an error-correcting code can be encoded either systematically or non-systematically. In a systematic encode, the input data is embedded in the encoded output. Conversely, in a non-systematic code, the output does not…
The traditional vocoders have the advantages of high synthesis efficiency, strong interpretability, and speech editability, while the neural vocoders have the advantage of high synthesis quality. To combine the advantages of two vocoders,…
Detecting anomalies in brain MRI scans using supervised deep learning methods presents challenges due to anatomical diversity and labor-intensive requirement of pixel-level annotations. Generative models like Denoising Diffusion…
Polar codes are a class of capacity-achieving codes for the binary-input discrete memoryless channels (B-DMCs). However, when applied in channels with intersymbol interference (ISI), the codes may perform poorly with BCJR equalization and…
This paper introduces a new approach to cost-effective, high-throughput hardware designs for Low Density Parity Check (LDPC) decoders. The proposed approach, called Non-Surjective Finite Alphabet Iterative Decoders (NS-FAIDs), exploits the…