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Recurrence plots and their associated quantifiers provide a robust framework for detecting and characterising complex patterns in non-linear time-series. In this paper, we employ recurrence quantification analysis to investigate the…

Populations and Evolution · Quantitative Biology 2025-07-29 M. S. Palmero , M. Bongestab , N. Marwan

Habitat fragmentation, often driven by human activities, alters ecological landscapes by disrupting connectivity and reshaping species interactions. In such fragmented environments, habitats can be modeled as networks, where individuals…

Populations and Evolution · Quantitative Biology 2025-11-07 James Austin Orgeron , Malbor Asllani

Learning from experience is a key feature of decision-making in cognitively complex organisms. Strategic interactions involving Bayesian inferential strategies can enable us to better understand how evolving individual choices to be…

Biological Physics · Physics 2025-12-01 Arunava Patra , Supratim Sengupta , Sagar Chakraborty

The paper contains the attempt to integration of the classical evolutionary game theory based on replicator dynamics and the state based approach of Houston and Mcnamara. In the new approach, individuals have different heritable strategies,…

Populations and Evolution · Quantitative Biology 2019-12-03 Krzysztof Argasinski , Ryszard Rudnicki

We consider a system of interacting Fisher-Wright diffusions with seed-bank. Individuals live in colonies and are subject to resampling and migration as long as they are active. Each colony has a structured seed-bank into which individuals…

Probability · Mathematics 2020-04-30 Andreas Greven , Frank den Hollander , Margriet Oomen

Spatial structure can play an important role in the evolution of cooperative behavior and the achievement of collective success of a population. In this paper, we explore the role of random and directed motion on spatial pattern formation…

Populations and Evolution · Quantitative Biology 2025-09-26 Tianyong Yao , Chenning Xu , Daniel B. Cooney

There are various examples of phenotypic plasticity in ecosystems that serve as the basis for a wide range of inducible defences against predation. These strategies include camouflage, burrowing, mimicry, evasive actions, and even…

Populations and Evolution · Quantitative Biology 2025-01-06 Sangeeta Saha , Swadesh Pal , Roderick Melnik

Personality traits, such as boldness and shyness, play a significant role in shaping the survival strategies of animals. Industrial pollution has long posed serious threats to ecosystems and is typically distributed heterogeneously.…

Populations and Evolution · Quantitative Biology 2025-01-23 Tianxu Wang , Jiwoon Sim , Hao Wang

In times of plenty expectations rise, just as in times of crisis they fall. This can be mathematically described as a Win-Stay-Lose-Shift strategy with dynamic aspiration levels, where individuals aspire to be as wealthy as their average…

Physics and Society · Physics 2016-10-04 Marco A. Amaral , Lucas Wardil , Matjaz Perc , Jafferson K. L. da Silva

I present three models of plant--pathogen interactions. The models are stochastic and spatially explicit at the scale of individual plants. For each model, I use a version of pair approximation or moment closure along with a separation of…

Numerical Analysis · Mathematics 2025-10-20 David H. Brown

Spatiotemporal patterns are often modeled using reaction-diffusion equations, which combine complex reactions between constituents with ideal diffusive motion. Such descriptions neglect physical interactions between constituents, which…

Biological Physics · Physics 2023-06-09 Chengjie Luo , David Zwicker

We introduce a model of traveling agents ({\it e.g.} frugivorous animals) who feed on randomly located vegetation patches and disperse their seeds, thus modifying the spatial distribution of resources in the long term. It is assumed that…

Populations and Evolution · Quantitative Biology 2015-05-13 D. Boyer , O. López-Corona

We investigate the impact of parity on the abundance of weak species in the context of the simplest generalization of the rock-paper-scissors model to an arbitrary number of species -- we consider models with a total number of species…

Populations and Evolution · Quantitative Biology 2021-07-12 P. P. Avelino , B. F. de Oliveira , R. S. Trintin

There is mounting evidence that species interactions often involve long-term memory, with highly-varying waiting times between successive events and long-range temporal correlations. Accounting for memory undermines the common Markovian…

Populations and Evolution · Quantitative Biology 2025-11-24 Ohad Vilk , Mauro Mobilia , Michael Assaf

Discrete time, spatially extended models play an important role in ecology, modelling population dynamics of species ranging from micro-organisms to birds. An important question is how 'bottom up', individual-based models can be…

Populations and Evolution · Quantitative Biology 2023-01-20 Linnéa Gyllingberg , David J. T. Sumpter , Åke Brännström

We study a set of six-species ecological models where each species has two predators and two preys. On a square lattice the time evolution is governed by iterated invasions between the neighboring predator-prey pairs chosen at random and by…

Populations and Evolution · Quantitative Biology 2009-11-10 Gyorgy Szabo

The spatial scale of population synchrony gives the characteristic distance at which the population fluctuations are correlated. Therefore, it gives also the characteristic size of the regions of simultaneous population depletion, or even…

Populations and Evolution · Quantitative Biology 2020-12-22 Miguel Ángel Fernández-Grande , Francisco Javier Cao-Garcia

We study a variant of the cyclic Lotka-Volterra model with three-agent interactions. Inspired by a multiplayer variation of the Rock-Paper-Scissors game, the model describes an ideal ecosystem in which cyclic competition among three species…

Populations and Evolution · Quantitative Biology 2020-10-09 Filippo Palombi , Stefano Ferriani , Simona Toti

Finding a target in a complex environment is a fundamental challenge in nature, from chemical reactions to sperm reaching an egg. An effective strategy to reduce the time needed to reach a target is to deploy many searchers, increasing the…

Statistical Mechanics · Physics 2025-07-15 Elisabetta Ellettari , Giacomo Nasuti , Alberto Bassanoni , Alessandro Vezzani , Raffaella Burioni

The goal of this article is to contribute towards the conceptual and quantitative understanding of the evolutionary benefits for (microbial) populations to maintain a seed bank (consisting of dormant individuals) when facing fluctuating…

Probability · Mathematics 2024-07-02 Jochen Blath , Felix Hermann , Martin Slowik
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