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Achieving complete reproducibility in science, particularly in research fields such as biodiversity, is challenging due to analytical choices, bias and interpretation. Here, we examine examples of reproducibility in biological systematics,…

Other Quantitative Biology · Quantitative Biology 2025-08-01 Charles Morphy D. Santos , Luciana Campos Paulino , Michaella P. Andrade , Gabriel Tognella-Poccia , João Paulo Gois

Automated Machine Learning (AutoML) technology can lower barriers in data work yet still requires human intervention to be functional. However, the complex and collaborative process resulting from humans and machines trading off work makes…

Human-Computer Interaction · Computer Science 2023-04-07 Jennifer Rogers and , Anamaria Crisan

Analytics play an important role in modern business. Companies adapt data science lifecycles to their culture to seek productivity and improve their competitiveness among others. Data science lifecycles are fairly an important contributing…

Machine Learning · Computer Science 2025-10-09 Rohith Mahadevan

Rising concern for the societal implications of artificial intelligence systems has inspired demands for greater transparency and accountability. However the datasets which empower machine learning are often used, shared and re-used with…

The ability to replicate predictions by machine learning (ML) or artificial intelligence (AI) models and results in scientific workflows that incorporate such ML/AI predictions is driven by numerous factors. An uncertainty-aware metric that…

Machine Learning · Computer Science 2023-08-28 Line Pouchard , Kristofer G. Reyes , Francis J. Alexander , Byung-Jun Yoon

Human mobility is a fundamental pillar of urban science and sustainability, providing critical insights into energy consumption, carbon emissions, and public health. However, the discovery of universal mobility laws is currently hindered by…

Machine Learning · Computer Science 2025-12-30 Yuan Yuan , Yukun Liu , Chonghua Han , Jie Feng , Yong Li

Reproducibility is a confused terminology. In this paper, I take a fundamental view on reproducibility rooted in the scientific method. The scientific method is analysed and characterised in order to develop the terminology required to…

Machine Learning · Computer Science 2022-01-19 Odd Erik Gundersen

Laboratory research is a complex, collaborative process that involves several stages, including hypothesis formulation, experimental design, data generation and analysis, and manuscript writing. Although reproducibility and data sharing are…

Other Quantitative Biology · Quantitative Biology 2025-02-12 Katharine Y. Chen , Maria Toro-Moreno , Arvind Rasi Subramaniam

One of the challenges in machine learning research is to ensure that presented and published results are sound and reliable. Reproducibility, that is obtaining similar results as presented in a paper or talk, using the same code and data…

Data science projects often involve various machine learning (ML) methods that depend on data, code, and models. One of the key activities in these projects is the selection of a model or algorithm that is appropriate for the data analysis…

Machine Learning · Computer Science 2023-11-27 Cristina Tavares , Nathalia Nascimento , Paulo Alencar , Donald Cowan

Machine Learning is transforming medical research by improving diagnostic accuracy and personalizing treatments. General ML models trained on large datasets identify broad patterns across populations, but their effectiveness is often…

Machine Learning · Computer Science 2024-12-24 Gideon Vos , Liza van Eijk , Zoltan Sarnyai , Mostafa Rahimi Azghadi

Large Language Models have gained remarkable interest in industry and academia. The increasing interest in LLMs in academia is also reflected in the number of publications on this topic over the last years. For instance, alone 78 of the…

Scientific workflows have become essential for orchestrating complex computational processes across distributed resources, managing large datasets, and ensuring reproducibility in modern research. The Workflows Community Summit 2025, held…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-06 Irene Bonati , Silvina Caino-Lores , Tainã Coleman , Sagar Dolas , Sandro Fiore , Venkatesh Kannan , Marco Verdicchio , Sean R. Wilkinson , Rafael Ferreira da Silva

Retrieval-Augmented Generation (RAG) is increasingly employed in generative AI-driven scientific workflows to integrate rapidly evolving scientific knowledge bases, yet its reliability is frequently compromised by non-determinism in their…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-24 Baiqiang Wang , Dongfang Zhao , Nathan R Tallent , Luanzheng Guo

Reproducibility should be a cornerstone of scientific research and is a growing concern among the scientific community and the public. Understanding how to design services and tools that support documentation, preservation and sharing is…

Human-Computer Interaction · Computer Science 2019-03-15 Sebastian S. Feger , Sünje Dallmeier-Tiessen , Albrecht Schmidt , Paweł W. Woźniak

As Machine Learning (ML) gains adoption across industries and new use cases, practitioners increasingly realize the challenges around effectively developing and iterating on ML systems: reproducibility, debugging, scalability, and…

Machine Learning · Computer Science 2023-03-22 Jacopo Tagliabue , Hugo Bowne-Anderson , Ville Tuulos , Savin Goyal , Romain Cledat , David Berg

As the Lakehouse architecture becomes more widespread, ensuring the reproducibility of data workloads over data lakes emerges as a crucial concern for data engineers. However, achieving reproducibility remains challenging. The size of data…

Databases · Computer Science 2024-04-23 Jacopo Tagliabue , Ciro Greco

Software organizations are increasingly incorporating machine learning (ML) into their product offerings, driving a need for new data management tools. Many of these tools facilitate the initial development of ML applications, but…

Software Engineering · Computer Science 2022-07-19 Shreya Shankar , Aditya Parameswaran

Machine learning (ML) algorithms are showing a growing trend in helping the scientific communities across different disciplines and institutions to address large and diverse data problems. However, many available ML tools are…

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