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Scientists often use observational time series data to study complex natural processes, but regression analyses often assume simplistic dynamics. Recent advances in deep learning have yielded startling improvements to the performance of…

Machine Learning · Computer Science 2023-04-21 Cory Shain , William Schuler

Large language models store not only isolated facts but also rules that support reasoning across symbolic expressions, natural language explanations, and concrete instances. Yet most model editing methods are built for fact-level knowledge,…

Computation and Language · Computer Science 2026-04-10 Yating Wang , Wenting Zhao , Yaqi Zhao , Yongshun Gong , Yilong Yin , Haoliang Sun

The inapplicability of amino acid covariation methods to small protein families has limited their use for structural annotation of whole genomes. Recently, deep learning has shown promise in allowing accurate residue-residue contact…

Biomolecules · Quantitative Biology 2019-09-10 Joe G Greener , Shaun M Kandathil , David T Jones

Recently, machine learning methods have gained significant traction in scientific computing, particularly for solving Partial Differential Equations (PDEs). However, methods based on deep neural networks (DNNs) often lack convergence…

Artificial Intelligence · Computer Science 2025-06-16 Li Liu , Heng Yong

Constant envelope (CE) precoding design is of great interest for massive multiuser multi-input multi-output systems because it can significantly reduce hardware cost and power consumption. However, existing CE precoding algorithms are…

Signal Processing · Electrical Eng. & Systems 2020-06-30 Yunfeng He , Hengtao , He , Chao-Kai Wen , Shi Jin

Molecular docking is an important tool for structure-based drug design, accelerating the efficiency of drug development. Complex and dynamic binding processes between proteins and small molecules require searching and sampling over a wide…

Chemical Physics · Physics 2024-02-23 Runqiu Shu , Bowen Liu , Zhaoping Xiong , Xiaopeng Cui , Yunting Li , Wei Cui , Man-Hong Yung , Nan Qiao

Quantum kernel methods are a promising method in quantum machine learning thanks to the guarantees connected to them. Their accessibility for analytic considerations also opens up the possibility of prescreening datasets based on their…

Quantum Physics · Physics 2024-08-05 Sebastian Egginger , Alona Sakhnenko , Jeanette Miriam Lorenz

Machine learning enables powerful cosmological inference but typically requires many high-fidelity simulations covering many cosmological models. Transfer learning offers a way to reduce the simulation cost by reusing knowledge across…

Cosmology and Nongalactic Astrophysics · Physics 2025-10-23 Veena Krishnaraj , Adrian E. Bayer , Christian Kragh Jespersen , Peter Melchior

The study of structure-spectrum relationships is essential for spectral interpretation, impacting structural elucidation and material design. Predicting spectra from molecular structures is challenging due to their complex relationships.…

Computational Physics · Physics 2024-08-29 Fanjie Xu , Wentao Guo , Feng Wang , Lin Yao , Hongshuai Wang , Fujie Tang , Zhifeng Gao , Linfeng Zhang , Weinan E , Zhong-Qun Tian , Jun Cheng

Out-of-distribution (OOD) generalization is challenging because distribution shifts come in many forms. Numerous algorithms exist to address specific settings, but choosing the right training algorithm for the right dataset without trial…

Machine Learning · Computer Science 2025-06-03 Liangze Jiang , Damien Teney

The potential harms of the under-representation of minorities in training data, particularly in multi-modal settings, is a well-recognized concern. While there has been extensive effort in detecting such under-representation, resolution has…

Machine Learning · Computer Science 2024-12-03 Mahdi Erfanian , H. V. Jagadish , Abolfazl Asudeh

The H\"uckel Hamiltonian is an incredibly simple tight-binding model famed for its ability to capture qualitative physics phenomena arising from electron interactions in molecules and materials. Part of its simplicity arises from using only…

Current deep learning models are mostly build upon neural networks, i.e., multiple layers of parameterized differentiable nonlinear modules that can be trained by backpropagation. In this paper, we explore the possibility of building deep…

Machine Learning · Computer Science 2020-07-07 Zhi-Hua Zhou , Ji Feng

Machine learning has emerged as a new tool in chemistry to bypass expensive experiments or quantum-chemical calculations, for example, in high-throughput screening applications. However, many machine learning studies rely on small data…

Machine Learning · Computer Science 2024-10-15 Thorren Kirschbaum , Annika Bande

Machine-learned interatomic potentials are revolutionising atomistic materials simulations by providing accurate and scalable predictions within the scope covered by the training data. However, generation of an accurate and robust training…

Materials Science · Physics 2025-07-30 Mariia Radova , Wojciech G. Stark , Connor S. Allen , Reinhard J. Maurer , Albert P. Bartók

Predicting bioactivity and physical properties of small molecules is a central challenge in drug discovery. Deep learning is becoming the method of choice but studies to date focus on mean accuracy as the main metric. However, to replace…

Machine Learning · Computer Science 2019-07-26 Yao Zhang , Alpha A. Lee

Cryo-electron microscopy (cryo-EM) has become a major experimental technique to determine the structures of large protein complexes and molecular assemblies, as evidenced by the 2017 Nobel Prize. Although cryo-EM has been drastically…

Biomolecules · Quantitative Biology 2021-06-01 Dong Si , Andrew Nakamura , Runbang Tang , Haowen Guan , Jie Hou , Ammaar Firozi , Renzhi Cao , Kyle Hippe , Minglei Zhao

We propose a novel pitch estimation technique called DeepF0, which leverages the available annotated data to directly learns from the raw audio in a data-driven manner. F0 estimation is important in various speech processing and music…

Audio and Speech Processing · Electrical Eng. & Systems 2021-02-15 Satwinder Singh , Ruili Wang , Yuanhang Qiu

Recommender Systems (RS) have became a popular research topic and, since 2016, Deep Learning methods and techniques have been increasingly explored in this area. News RS are aimed to personalize users experiences and help them discover…

Information Retrieval · Computer Science 2020-01-15 Gabriel de Souza Pereira Moreira

Kernel learning methods are among the most effective learning methods and have been vigorously studied in the past decades. However, when tackling with complicated tasks, classical kernel methods are not flexible or "rich" enough to…

Machine Learning · Computer Science 2019-10-08 Jiaxuan Xie , Fanghui Liu , Kaijie Wang , Xiaolin Huang