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Related papers: Algal Optics

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Phototaxis of many species of green algae relies upon directional sensitivity of their membrane-bound photoreceptors, which arises from the presence of a pigmented "eyespot" behind them that blocks light passing through the cell body from…

Soft Condensed Matter · Physics 2026-03-12 Sumit Kumar Birwa , Ming Yang , Adriana I. Pesci , Raymond E. Goldstein

We study how simple eukaryotic organisms make decisions in response to competing stimuli in the context of phototaxis by the unicellular alga $Chlamydomonas~reinhardtii$. While negatively phototactic cells swim directly away from a…

As for many motile micro-algae, the freshwater species Chlamydomonas reinhardtii can detect light sources and adapt its motile behavior in response. Here, we show that suspensions of photophobic cells can be unstable to density…

Microbial colonization of surfaces represents the first step towards biofilm formation, which is a recurring phenomenon in nature with beneficial and detrimental implications in technological and medical settings. Consequently, there is a…

Phototaxis is an important reaction to light displayed by a wide range of motile microorganisms. Flagellated eukaryotic microalgae in particular, like the model organism Chlamydomonas reinhardtii, steer either towards or away from light by…

Cell Behavior · Quantitative Biology 2016-11-28 Jorge Arrieta , Ana Barreira , Maurizio Chioccioli , Marco Polin , Idan Tuval

Understanding how microorganisms navigate in complex environments is a central question in active matter and biological physics. Phototaxis - the ability to use light as a navigation cue - is a widespread strategy in motile microalgae to…

The unicellular biflagellate green alga {\it Chlamydomonas reinhardtii} has been an important model system in biology for decades, and in recent years it has started to attract growing attention also within the biophysics community. Here we…

Cell Behavior · Quantitative Biology 2016-11-23 Raphaël Jeanneret , Matteo Contino , Marco Polin

Phototaxis is one of the most fundamental stimulus-response behaviors in biology wherein motile micro-organisms sense light gradients to swim towards the light source. Apart from single cell survival and growth, it plays a major role at the…

Soft Condensed Matter · Physics 2020-01-08 Sujeet Kumar Choudhary , Aparna Baskaran , Prerna Sharma

Interactions between microorganisms and solid boundaries play an important role in biological processes, like egg fertilisation, biofilm formation and soil colonisation, where microswimmers move within a structured environment. Despite…

Biological Physics · Physics 2015-12-23 Matteo Contino , Enkeleida Lushi , Idan Tuval , Vasily Kantsler , Marco Polin

The light environment controls the swimming of microalgae through a light-seeking and avoiding behaviour, which is known as phototaxis. In this work, we exploit phototaxis to control the migration and concentration of populations of the…

Biological Physics · Physics 2021-07-21 Praneet Prakash , Ottavio A. Croze

It has long been believed that swimming eukaryotes feel solid boundaries through direct ciliary contact. Specifically, based on observations of behavior of green alga Chlamydomonas reinhardtii it has been reported that it is their "flagella…

Fluid Dynamics · Physics 2018-07-18 Mehdi Mirzakhanloo , Mohammad-Reza Alam

The unicellular microalga Chlamydomonas reinhardtii is widely recognized as a premier model living microswimmer for physicists and biophysicists. However, the interest around C. reinhardtii goes beyond its swimming capabilities. In fact,…

Photosynthetic eukaryotes show a remarkable variability in photosynthesis, including large differences in light harvesting proteins and pigment composition. In vivo circular spectropolarimetry enables us to probe the molecular architecture…

Biomolecules · Quantitative Biology 2018-08-27 C. H. Lucas Patty , Freek Ariese , Wybren Jan Buma , Inge Loes ten Kate , Rob J. M. van Spanning , Frans Snik

When attracted by a stimulus (e. g. light), microswimmers can build up very densely at a constriction and thus cause clogging. The micro-alga \textit{Chlamydomonas Reinhardtii} is used here as a model system to study this phenomenon. Its…

Soft Condensed Matter · Physics 2020-01-07 Marvin Brun-Cosme-Bruny , Vincent Borne , Sylvain Faure , Bertrand Maury , Philippe Peyla , Salima Rafai

Some micro-algae are sensitive to light intensity gradients. This property is known as phototaxis: the algae swim toward a light source (positive phototaxis). We use this property to control the motion of micro-algae within a Poiseuille…

Soft Condensed Matter · Physics 2015-06-12 Xabel Garcia , Salima Rafaï , Philippe Peyla

In Nature there are significant relationships known between microorganisms from two kingdoms of life, as in the supply of vitamin B$_{12}$ by bacteria to algae. Such interactions motivate general investigations into the spatio-temporal…

Soft Condensed Matter · Physics 2023-12-14 Praneet Prakash , Yasa Baig , Francois J. Peaudecerf , Raymond E. Goldstein

The motility of microorganisms is influenced greatly by their hydrodynamic interactions with the fluidic environment they inhabit. We show by direct experimental observation of the bi-flagellated alga Chlamydomonas reinhardtii that fluid…

Biological Physics · Physics 2015-11-03 Boyang Qin , Arvind Gopinath , Jing Yang , Jerry P Gollub , Paulo E Arratia

The beating flagella of the green alga Chlamydomonas reinhardtii play a prominent role in cellular mechanics, enabling cells to both displace and sense surrounding fluid. Specifically, flagellum-induced fluid transport enables microalgae to…

Fluid Dynamics · Physics 2026-03-10 Md Iftekhar Yousuf Emon , Gregorius R. Pradipta , Xiang Cheng , Xin Yong

Flagella allow eukaryotic cells to move and pump fluid. We present the first three-dimensional, time-resolved imaging of the flagellar waveform of Chlamydomonas reinhardtii, a model alga found in fresh water. During the power stroke, we…

Biological Physics · Physics 2022-10-18 Laurence G. Wilson , Martin A. Bees

We investigate how light polarization affects the motion of photo-responsive algae, \textit{Euglena gracilis}. In a uniformly polarized field, cells swim approximately perpendicular to the polarization direction and form a nematic state…

Soft Condensed Matter · Physics 2021-02-09 Siyuan Yang , Mingji Huang , Yongfeng Zhao , H. P. Zhang
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