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Fast MRI aims to reconstruct a high fidelity image from partially observed measurements. Exuberant development in fast MRI using deep learning has been witnessed recently. Meanwhile, novel deep learning paradigms, e.g., Transformer based…

Computer Vision and Pattern Recognition · Computer Science 2022-07-07 Jiahao Huang , Xiaodan Xing , Zhifan Gao , Guang Yang

In this work, we address the challenge of Scene Change Detection (SCD), where the goal is to identify variations between two images of the same location captured at different times. Existing SCD models often overlook the varying importance…

Computer Vision and Pattern Recognition · Computer Science 2026-05-21 Jiae Yoon , Ue-Hwan Kim

This contribution presents a deep learning method for the segmentation of prostate zones in MRI images based on U-Net using additive and feature pyramid attention modules, which can improve the workflow of prostate cancer detection and…

Image and Video Processing · Electrical Eng. & Systems 2023-09-06 Pablo Cesar Quihui-Rubio , Daniel Flores-Araiza , Miguel Gonzalez-Mendoza , Christian Mata , Gilberto Ochoa-Ruiz

Segmentation of liver structures in multi-phase contrast-enhanced computed tomography (CECT) plays a crucial role in computer-aided diagnosis and treatment planning. In this study, we investigate the performance of UNet-based architectures…

Computer Vision and Pattern Recognition · Computer Science 2026-01-21 Doan-Van-Anh Ly , Thanh-Hai Le , Thi-Thu-Hien Pham

Automated segmentation of Pancreatic Ductal Adenocarcinoma (PDAC) from MRI is critical for clinical workflows but is hindered by poor tumor-tissue contrast and a scarcity of annotated data. This paper details our submission to the PANTHER…

Computer Vision and Pattern Recognition · Computer Science 2025-09-01 Omer Faruk Durugol , Maximilian Rokuss , Yannick Kirchhoff , Klaus H. Maier-Hein

Endometrial cancer, the fourth most common cancer in females in the United States, with the lifetime risk for developing this disease is approximately 2.8% in women. Precise histologic evaluation and molecular classification of endometrial…

Computer Vision and Pattern Recognition · Computer Science 2024-03-28 Manu Goyal , Laura J. Tafe , James X. Feng , Kristen E. Muller , Liesbeth Hondelink , Jessica L. Bentz , Saeed Hassanpour

Gene enhancers control when and where genes switch on, yet their sequence diversity and tissue specificity make them hard to pinpoint in colorectal cancer. We take a sequence-only route and fine-tune DNABERT-2, a transformer genomic…

Genomics · Quantitative Biology 2025-10-01 Darren King , Yaser Atlasi , Gholamreza Rafiee

Previous works on the Recurrent Neural Network-Transducer (RNN-T) models have shown that, under some conditions, it is possible to simplify its prediction network with little or no loss in recognition accuracy (arXiv:2003.07705 [eess.AS],…

Computation and Language · Computer Science 2021-09-17 Rami Botros , Tara N. Sainath , Robert David , Emmanuel Guzman , Wei Li , Yanzhang He

Deep learning algorithms have become the golden standard for segmentation of medical imaging data. In most works, the variability and heterogeneity of real clinical data is acknowledged to still be a problem. One way to automatically…

Image and Video Processing · Electrical Eng. & Systems 2022-02-25 Arkadiy Dushatskiy , Gerry Lowe , Peter A. N. Bosman , Tanja Alderliesten

This work proposes a novel framework, Uncertainty-Guided Cross Attention Ensemble Mean Teacher (UG-CEMT), for achieving state-of-the-art performance in semi-supervised medical image segmentation. UG-CEMT leverages the strengths of…

Computer Vision and Pattern Recognition · Computer Science 2024-12-23 Meghana Karri , Amit Soni Arya , Koushik Biswas , Nicol`o Gennaro , Vedat Cicek , Gorkem Durak , Yuri S. Velichko , Ulas Bagci

Cross-entropy pretraining and preference alignment update the same transformer weights, but leave geometrically distinct traces. We characterise this asymmetry with a relative-subspace-fraction probe that tracks how weight deltas align with…

Machine Learning · Computer Science 2026-05-19 Valeria Ruscio , Eli-Shaoul Khedouri , Keiran Thompson

Diffusion MRI (dMRI) enables non-invasive assessment of prostate microstructure but conventional dMRI metrics such as the Apparent Diffusion Coefficient in multiparametric MRI and reflect a mixture of underlying tissues features rather than…

This decade is marked by the introduction of Vision Transformer, a radical paradigm shift in broad computer vision. A similar trend is followed in medical imaging, UNet, one of the most influential architectures, has been redesigned with…

Computer Vision and Pattern Recognition · Computer Science 2023-08-29 Nabil Ibtehaz , Daisuke Kihara

The detailed images produced by Magnetic Resonance Imaging (MRI) provide life-critical information for the diagnosis and treatment of prostate cancer. To provide standardized acquisition, interpretation and usage of the complex MRI images,…

Image and Video Processing · Electrical Eng. & Systems 2023-09-25 Arnab Das , Suhita Ghosh , Sebastian Stober

Purpose: Segmentation of the breast region in dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) is essential for the automatic measurement of breast density and the quantitative analysis of imaging findings. This study aims to…

Image and Video Processing · Electrical Eng. & Systems 2024-10-04 Sam Narimani , Solveig Roth Hoff , Kathinka Dæhli Kurz , Kjell-Inge Gjesdal , Jurgen Geisler , Endre Grovik

The accurate estimation of predictive uncertainty carries importance in medical scenarios such as lung node segmentation. Unfortunately, most existing works on predictive uncertainty do not return calibrated uncertainty estimates, which…

Machine Learning · Computer Science 2022-05-31 Shi Hu , Daniel Worrall , Stefan Knegt , Bas Veeling , Henkjan Huisman , Max Welling

Artificial intelligence foundation models are increasingly deployed for prostate cancer Gleason grading, where GP3/GP4 distinction directly impacts treatment decisions. However, these models may achieve high validation accuracy by learning…

Computer Vision and Pattern Recognition · Computer Science 2025-12-18 Joshua L. Ebbert , Dennis Della Corte

Multiparametric magnetic resonance imaging (mp-MRI) has shown excellent results in the detection of prostate cancer (PCa). However, characterizing prostate lesions aggressiveness in mp-MRI sequences is impossible in clinical practice, and…

Image and Video Processing · Electrical Eng. & Systems 2022-11-28 Audrey Duran , Gaspard Dussert , Olivier Rouvière , Tristan Jaouen , Pierre-Marc Jodoin , Carole Lartizien

Pediatric brain tumor segmentation presents unique challenges due to the rarity and heterogeneity of these malignancies, yet remains critical for clinical diagnosis and treatment planning. We propose an ensemble approach integrating…

Image and Video Processing · Electrical Eng. & Systems 2025-10-13 Yuxiao Yi , Qingyao Zhuang , Zhi-Qin John Xu , Xiaowen Wang , Yan Ren , Tianming Qiu

In the field of medical images, although various works find Swin Transformer has promising effectiveness on pixelwise dense prediction, whether pre-training these models without using extra dataset can further boost the performance for the…

Computer Vision and Pattern Recognition · Computer Science 2024-08-13 Xinrong Hu , Dewen Zeng , Yawen Wu , Xueyang Li , Yiyu Shi