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The design of fluid channel structures of reactors or separators of chemical processes is key to enhancing the mass transfer processes inside the devices. However, the systematic design of channel topological structures is difficult for…

Fluid Dynamics · Physics 2025-03-07 Chenhui Kou , Yuhui Yin , Min Zhu , Shengkun Jia , Yiqing Luo , Xigang Yuana , Lu Lu

In this work we focus on how noise propagates in biochemical reaction networks and affects sensitivities of the system. We discover that the stochastic fluctuations can enhance sensitivities in one region of the value of control parameters…

Molecular Networks · Quantitative Biology 2008-06-24 Kyung Hyuk Kim , Hong Qian , Herbert M. Sauro

We investigate the regularity of spontaneous spiking activity on Newman-Watts small-world networks consisting of biophysically realistic Hodgkin-Huxley neurons with a tunable intensity of intrinsic noise and fraction of blocked…

Biological Physics · Physics 2009-06-05 Mahmut Ozer , Matjaz Perc , Muhammet Uzuntarla

Periodic pulse train stimulation is generically used to study the function of the nervous system and to counteract disease-related neuronal activity, e.g., collective periodic neuronal oscillations. The efficient control of neuronal…

Adaptation and Self-Organizing Systems · Physics 2020-08-05 Kestutis Pyragas , Augustinas P. Fedaravičius , Tatjana Pyragienė

This paper uses a simple optogenetic model to compare the timing distortion between a randomly-generated target spike sequence and an externally-stimulated neuron spike sequence. Optogenetics is an emerging field of neuroscience where…

Neurons and Cognition · Quantitative Biology 2020-04-24 Adam Noel , Dimitrios Makrakis , Andrew W. Eckford

Conventionally, information is represented by spike rates in the neural system. Here, we consider the ability of temporally modulated activities in neuronal networks to carry information extra to spike rates. These temporal modulations,…

Neurons and Cognition · Quantitative Biology 2014-09-09 C. C. Alan Fung , He Wang , Kin Lam , K. Y. Michael Wong , Si Wu

The effective use of limited resources for controlling spreading processes on networks is of prime significance in diverse contexts, ranging from the identification of "influential spreaders" for maximizing information dissemination and…

Social and Information Networks · Computer Science 2022-06-01 Andrey Y. Lokhov , David Saad

The seemingly stochastic transient dynamics of neocortical circuits observed in vivo have been hypothesized to represent a signature of ongoing stochastic inference. In vitro neurons, on the other hand, exhibit a highly deterministic…

Neurons and Cognition · Quantitative Biology 2017-03-14 Mihai A. Petrovici , Johannes Bill , Ilja Bytschok , Johannes Schemmel , Karlheinz Meier

One major challenge in neuroscience is the identification of interrelations between signals reflecting neural activity and how information processing occurs in the neural circuits. At the cellular and molecular level, mechanisms of signal…

Applications · Statistics 2019-09-27 Giacomo Aletti , Davide Lonardoni , Giovanni Naldi , Thierry Nieus

The problem of finding the optimal set of source nodes in a diffusion network that maximizes the spread of information, influence, and diseases in a limited amount of time depends dramatically on the underlying temporal dynamics of the…

Social and Information Networks · Computer Science 2012-05-09 Manuel Gomez Rodriguez , Bernhard Schölkopf

Neuronal network synchronization has received wide interests. Network connection structure is known to play a key role in its synchronization. In the present manuscript, we study the influence of initial membrane potentials together with…

Dynamical Systems · Mathematics 2021-12-14 Xiaoyue Wu , Congping lin , Yiwei Zhang

A central problem in systems neuroscience is to determine how an external stimulation is propagated through the brain so as to produce a reaction. Current deterministic and stochastic control models quantify transition costs between brain…

Optimization and Control · Mathematics 2026-03-23 Cristian Mendico

Animals learn to predict external contingencies from experience through a process of conditioning. A natural mechanism for conditioning is stimulus substitution, whereby the neuronal response to a stimulus with no prior behavioral…

Neurons and Cognition · Quantitative Biology 2024-09-23 Pantelis Vafidis , Antonio Rangel

Numerous studies have shown that neuronal responses are modulated by stimulus properties, and also by the state of the local network. However, little is known about how activity fluctuations of neuronal populations modulate the sensory…

Neurons and Cognition · Quantitative Biology 2017-11-07 Iñigo Arandia-Romero , Seiji Tanabe , Jan Drugowitsch , Adam Kohn , Rubén Moreno-Bote

In computer simulations of spiking neural networks, often it is assumed that every two neurons of the network are connected by a probability of 2\%, 20\% of neurons are inhibitory and 80\% are excitatory. These common values are based on…

Neurons and Cognition · Quantitative Biology 2015-03-06 Hamed Seyed-allaei

Objective. Precise control of neural systems is essential to experimental investigations of how the brain controls behavior and holds the potential for therapeutic manipulations to correct aberrant network states. Model predictive control,…

Neurons and Cognition · Quantitative Biology 2024-08-06 Christof Fehrman , C. Daniel Meliza

We are interested in understanding the neural correlates of attentional processes using first principles. Here we apply a recently developed first principles approach that uses transmitted information in bits per joule to quantify the…

Information Theory · Computer Science 2016-05-13 Siavash Ghavami , Vahid Rahmati , Farshad Lahouti , Lars Schwabe

Background: Spike trains of multiple neurons can be analyzed following the summed population (SP) or the labeled line (LL) hypothesis. Responses to external stimuli are generated by a neuronal population as a whole or the individual neurons…

Neurons and Cognition · Quantitative Biology 2018-09-17 Eero Satuvuori , Mario Mulansky , Andreas Daffertshofer , Thomas Kreuz

Spiking neural networks (SNNs) transmit information through discrete spikes, which performs well in processing spatial-temporal information. Due to the non-differentiable characteristic, there still exist difficulties in designing…

Neural and Evolutionary Computing · Computer Science 2021-05-28 Dongcheng Zhao , Yi Zeng , Yang Li

Recently, interest has grown in exploring the hypothesis that neural activity conveys information through precise spiking motifs. To investigate this phenomenon, various algorithms have been proposed to detect such motifs in Single Unit…

Neurons and Cognition · Quantitative Biology 2023-09-27 Laurent U Perrinet