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This article critically examines the foundational principles of contemporary AI methods, exploring the limitations that hinder its potential. We draw parallels between the modern AI landscape and the 20th-century Modern Synthesis in…

Neurons and Cognition · Quantitative Biology 2025-06-02 Zeki Doruk Erden , Boi Faltings

This article critically examines the foundational principles of contemporary AI methods, exploring the limitations that hinder its potential. We draw parallels between the modern AI landscape and the 20th-century Modern Synthesis in…

Other Computer Science · Computer Science 2025-07-08 Zeki Doruk Erden

The learning dynamics of biological brains and artificial neural networks are of interest to both neuroscience and machine learning. A key difference between them is that neural networks are often trained from a randomly initialized state…

Neural and Evolutionary Computing · Computer Science 2025-05-19 Benjamin Midler , Alejandro Pan Vazquez

Evolutionary Computation is a group of biologically inspired algorithms used to solve complex optimisation problems. It can be split into Evolutionary Algorithms, which take inspiration from genetic inheritance, and Swarm Intelligence…

Neural and Evolutionary Computing · Computer Science 2021-08-11 Sizhe Yuen , Thomas H. G. Ezard , Adam J. Sobey

A variety of methods have been applied to the architectural configuration and learning or training of artificial deep neural networks (DNN). These methods play a crucial role in the success or failure of the DNN for most problems and…

Neural and Evolutionary Computing · Computer Science 2021-11-30 Edgar Galván , Peter Mooney

This paper surveys foundation models for AI-enabled biological design, focusing on recent developments in applying large-scale, self-supervised models to tasks such as protein engineering, small molecule design, and genomic sequence design.…

Artificial Intelligence · Computer Science 2025-05-20 Asher Moldwin , Amarda Shehu

This paper grounds ethics in evolutionary biology, viewing moral norms as adaptive mechanisms that render cooperation fitness-viable under selection pressure. Current alignment approaches add ethics post hoc, treating it as an external…

Computers and Society · Computer Science 2025-10-17 Dylan Waldner

Natural evolution gives the impression of leading to an open-ended process of increasing diversity and complexity. If our goal is to produce such open-endedness artificially, this suggests an approach driven by evolutionary metaphor. On the…

Adaptation and Self-Organizing Systems · Physics 2018-12-13 Nicholas Guttenberg , Nathaniel Virgo , Alexandra Penn

The convergence of artificial intelligence (AI) and synthetic biology is rapidly accelerating the pace of biological discovery and engineering. AI techniques, such as large language models and biological design tools, are enabling the…

Other Quantitative Biology · Quantitative Biology 2024-05-01 Cindy Vindman , Benjamin Trump , Christopher Cummings , Madison Smith , Alexander J. Titus , Ken Oye , Valentina Prado , Eyup Turmus , Igor Linkov

The application of Artificial Intelligence (AI) to synthetic biology will provide the foundation for the creation of a high throughput automated platform for genetic design, in which a learning machine is used to iteratively optimise the…

Artificial Intelligence · Computer Science 2021-05-18 Wang-Zhou Dai , Liam Hallett , Stephen H. Muggleton , Geoff S. Baldwin

Artificial intelligence has advanced rapidly across perception, language, reasoning, and multimodal domains. Yet despite these achievements, modern AI systems remain fundamentally limited in their ability to self-monitor, self-correct, and…

Artificial Intelligence · Computer Science 2025-12-03 Noorbakhsh Amiri Golilarz , Sindhuja Penchala , Shahram Rahimi

Optimization for deep networks is currently a very active area of research. As neural networks become deeper, the ability in manually optimizing the network becomes harder. Mini-batch normalization, identification of effective respective…

Neural and Evolutionary Computing · Computer Science 2018-08-07 M. U. B. Dias , D. D. N. De Silva , S. Fernando

A new model for evolving Evolutionary Algorithms (EAs) is proposed in this paper. The model is based on the Multi Expression Programming (MEP) technique. Each MEP chromosome encodes an evolutionary pattern that is repeatedly used for…

Neural and Evolutionary Computing · Computer Science 2021-10-13 Mihai Oltean

In the present article, we propose a paradigm shift on evolving Artificial Neural Networks (ANNs) towards a new bio-inspired design that is grounded on the structural properties, interactions, and dynamics of protein networks (PNs): the…

Neural and Evolutionary Computing · Computer Science 2024-06-10 Oscar Lao , Konstantinos Zacharopoulos , Apostolos Fournaris , Rossano Schifanella , Ioannis Arapakis

The recent successes of deep learning and deep reinforcement learning have firmly established their statuses as state-of-the-art artificial learning techniques. However, longstanding drawbacks of these approaches, such as their poor sample…

Artificial Intelligence · Computer Science 2020-02-05 Thommen George Karimpanal

The pursuit of creating artificial intelligence (AI) mirrors our longstanding fascination with understanding our own intelligence. From the myths of Talos to Aristotelian logic and Heron's inventions, we have sought to replicate the marvels…

Neurons and Cognition · Quantitative Biology 2024-11-26 Nima Dehghani , Michael Levin

Evolutionary and bioinspired computation are crucial for efficiently addressing complex optimization problems across diverse application domains. By mimicking processes observed in nature, like evolution itself, these algorithms offer…

Neural and Evolutionary Computing · Computer Science 2025-01-14 Daniel Molina , Javier Del Ser , Javier Poyatos , Francisco Herrera

Embodied Artificial Intelligence (AI) is an intelligent system formed by agents and their environment through active perception, embodied cognition, and action interaction. Existing embodied AI remains confined to human-crafted setting, in…

Emerging Technologies · Computer Science 2026-02-05 Tongtong Feng , Xin Wang , Wenwu Zhu

Inherent limitations of contemporary machine learning systems in crucial areas -- importantly in continual learning, information reuse, comprehensibility, and integration with deliberate behavior -- are receiving increasing attention. To…

Computer Vision and Pattern Recognition · Computer Science 2025-10-22 Zeki Doruk Erden , Boi Faltings

Drawing on the idea that brain development is a Darwinian process of ``evolution + selection'' and the idea that the current state is a local equilibrium state of many bodies with self-organization and evolution processes driven by the…

Neural and Evolutionary Computing · Computer Science 2020-06-16 Ping Guo , Qian Yin
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