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Reaction-diffusion systems can describe a wide class of rhythmic spatiotemporal patterns observed in chemical and biological systems, such as circulating pulses on a ring, oscillating spots, target waves, and rotating spirals. These…

Pattern Formation and Solitons · Physics 2014-06-03 Hiroya Nakao , Tatsuo Yanagita , Yoji Kawamura

Spontaneous rhythmic oscillations are widely observed in various real-world systems. In particular, biological rhythms, which typically arise via synchronization of many self-oscillatory cells, often play important functional roles in…

Adaptation and Self-Organizing Systems · Physics 2021-06-11 Hiroya Nakao

Optimization of the stability of synchronized states between a pair of symmetrically coupled reaction-diffusion systems exhibiting rhythmic spatiotemporal patterns is studied in the framework of the phase reduction theory. The optimal…

Adaptation and Self-Organizing Systems · Physics 2017-08-02 Yoji Kawamura , Sho Shirasaka , Tatsuo Yanagita , Hiroya Nakao

We analyze synchronization of relaxation oscillations in multiple-timescale reaction-diffusion systems. Interpreting synchronization as convergence to frequency-synchronized wave-train solutions, we resolve for the first time the case of…

Analysis of PDEs · Mathematics 2026-01-12 Montie Avery , Paul Carter , Björn de Rijk , Arnd Scheel

Controlling rhythmic systems, typically modeled as limit-cycle oscillators, is an important subject in real-world problems. Phase reduction theory, which simplifies the multidimensional oscillator state under weak input to a single phase…

Adaptation and Self-Organizing Systems · Physics 2025-08-26 Koichiro Yawata , Norihisa Namura , Yuzuru Kato , Hiroya Nakao

The dynamics of spatiotemporal patterns in oscillatory reaction-diffusion systems subject to periodic forcing with a spatially random forcing amplitude field are investigated. Quenched disorder is studied using the resonantly forced complex…

Pattern Formation and Solitons · Physics 2009-10-31 C. J. Hemming , R. Kapral

We analyze the training of a two-layer autoencoder used to parameterize a flow-based generative model for sampling from a high-dimensional Gaussian mixture. Previous work shows that the phase where the relative probability between the modes…

Machine Learning · Computer Science 2025-02-11 Santiago Aranguri , Francesco Insulla

We develop a theory to calculate the effective phase diffusion coefficient and the mean phase velocity in periodically driven stochastic models with two discrete states. This theory is applied to a dichotomically driven Markovian two state…

Statistical Mechanics · Physics 2009-11-11 T. Prager , L. Schimansky-Geier

Building on the phase reduction theory formulated for reaction-diffusion systems with spatial translational symmetry, we develop a data-driven method that reconstructs the spatiotemporal phase dynamics of traveling and oscillating patterns.…

Adaptation and Self-Organizing Systems · Physics 2026-04-28 Takahiro Arai , Toshio Aoyagi , Yoji Kawamura

We present a phase autoencoder that encodes the asymptotic phase of a limit-cycle oscillator, a fundamental quantity characterizing its synchronization dynamics. This autoencoder is trained in such a way that its latent variables directly…

Adaptation and Self-Organizing Systems · Physics 2024-03-13 Koichiro Yawata , Kai Fukami , Kunihiko Taira , Hiroya Nakao

The stochastic FitzHugh-Nagumo model with time delayed-feedback is often studied in excitable regime to demonstrate the time-delayed control of coherence resonance. Here, we show that the impact of time-delayed feedback in the…

Adaptation and Self-Organizing Systems · Physics 2023-05-24 Vladimir V. Semenov , Andrei V. Bukh , Nadezhda Semenova

We investigate the synchronization dynamics of two coupled noise-driven FitzHugh-Nagumo systems, representing two neural populations. For certain choices of the noise intensities and coupling strength, we find cooperative stochastic…

Adaptation and Self-Organizing Systems · Physics 2025-07-29 Philipp Hövel , Sarang A. Shah , Markus A. Dahlem , Eckehard Schöll

We formulate a theory for phase reduction analysis of traveling breathers in reaction--diffusion systems with spatial translational symmetry. In this formulation, the spatial and temporal phases represent the position and oscillation of a…

Adaptation and Self-Organizing Systems · Physics 2025-10-27 Takahiro Arai , Yoji Kawamura

Complex chaotic dynamics, seen in natural and industrial systems like turbulent flows and weather patterns, often span vast spatial domains with interactions across scales. Accurately capturing these features requires a high-dimensional…

Chaotic Dynamics · Physics 2024-10-03 C. Ricardo Constante-Amores , Alec J. Linot , Michael D. Graham

Modeling and controlling complex spatiotemporal dynamical systems driven by partial differential equations (PDEs) often necessitate dimensionality reduction techniques to construct lower-order models for computational efficiency. This paper…

Systems and Control · Electrical Eng. & Systems 2024-09-12 Priyabrata Saha , Saibal Mukhopadhyay

This paper investigates the use of autoencoders and machine learning methods for detecting and analyzing quantum phase transitions in the Two-Component Bose-Hubbard Model. By leveraging deep learning models such as autoencoders, we…

Quantum Gases · Physics 2024-09-30 Iftekher S. Chowdhury , Binay Prakash Akhouri , Shah Haque , Eric Howard

Spatial L{\'{e}}vy-like flights are introduced as a way in the absorbing phase transitions to produce non-local interactions. We utilize the autoencoder, an unsupervised learning method, to predict the critical points for $(1+1)$-d directed…

Statistical Mechanics · Physics 2024-10-24 Yanyang Wang , Yuxiang Yang , Wei Li

We develop a phase reduction method for reaction-diffusion systems with a discrete delay. On the basis of the recent developments in the phase reduction theory for infinite-dimensional systems, we introduce a bilinear form tailored to…

Adaptation and Self-Organizing Systems · Physics 2026-03-06 Ayumi Ozawa , Yoji Kawamura

Diffusion-induced turbulence in spatially extended oscillatory media near a supercritical Hopf bifurcation can be controlled by applying global time-delay autosynchronization. We consider the complex Ginzburg-Landau equation in the…

Chaotic Dynamics · Physics 2009-11-10 C. Beta , A. S. Mikhailov

In exploring the simulation of human rhythmic perception and synchronization capabilities, this study introduces a computational model inspired by the physical and biological processes underlying rhythm processing. Utilizing a reservoir…

Neurons and Cognition · Quantitative Biology 2025-03-28 Zhongju Yuan , Wannes Van Ransbeeck , Geraint Wiggins , Dick Botteldooren
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