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Protecting patient privacy in healthcare records is a top priority, and redaction is a commonly used method for obscuring directly identifiable information in text. Rule-based methods have been widely used, but their precision is often low…

Despite being a unique source of information on patients' status and disease progression, clinical notes are characterized by high levels of duplication and information redundancy. In general domain text, it has been shown that…

Computation and Language · Computer Science 2023-12-18 Isotta Landi , Eugenia Alleva , Alissa A. Valentine , Lauren A. Lepow , Alexander W. Charney

De-identification is the task of identifying protected health information (PHI) in the clinical text. Existing neural de-identification models often fail to generalize to a new dataset. We propose a simple yet effective data augmentation…

Computation and Language · Computer Science 2020-10-13 Xiang Yue , Shuang Zhou

Clinical free-text data offers immense potential to improve population health research such as richer phenotyping, symptom tracking, and contextual understanding of patient care. However, these data present significant privacy risks due to…

Unstructured textual data is at the heart of healthcare systems. For obvious privacy reasons, these documents are not accessible to researchers as long as they contain personally identifiable information. One way to share this data while…

Cryptography and Security · Computer Science 2022-11-03 Yakini Tchouka , Jean-François Couchot , David Laiymani

De-identification is the task of detecting protected health information (PHI) in medical text. It is a critical step in sanitizing electronic health records (EHRs) to be shared for research. Automatic de-identification classifierscan…

Computation and Language · Computer Science 2019-06-13 Max Friedrich , Arne Köhn , Gregor Wiedemann , Chris Biemann

For sharing privacy-sensitive data, de-identification is commonly regarded as adequate for safeguarding privacy. Synthetic data is also being considered as a privacy-preserving alternative. Recent successes with numerical and tabular data…

Computation and Language · Computer Science 2025-03-05 Atiquer Rahman Sarkar , Yao-Shun Chuang , Noman Mohammed , Xiaoqian Jiang

Machine Learning approaches to Natural Language Processing tasks benefit from a comprehensive collection of real-life user data. At the same time, there is a clear need for protecting the privacy of the users whose data is collected and…

Computation and Language · Computer Science 2022-11-16 David Ifeoluwa Adelani , Ali Davody , Thomas Kleinbauer , Dietrich Klakow

Deidentification seeks to anonymize textual data prior to distribution. Automatic deidentification primarily uses supervised named entity recognition from human-labeled data points. We propose an unsupervised deidentification method that…

Computation and Language · Computer Science 2022-10-24 John X. Morris , Justin T. Chiu , Ramin Zabih , Alexander M. Rush

Large language models trained on clinical text risk exposing sensitive patient information, yet differential privacy (DP) methods often severely degrade the diagnostic accuracy needed for deployment. Despite rapid progress in DP…

Machine Learning · Computer Science 2025-11-20 Mathieu Dufour , Andrew Duncan

Removing patient-specific information from medical images is crucial to enable sharing and open science without compromising patient identities. However, many methods currently used for deidentification have negative effects on downstream…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Adrienne Kline , Abhijit Gaonkar , Daniel Pittman , Chris Kuehn , Nils Forkert

Differentially private training algorithms like DP-SGD protect sensitive training data by ensuring that trained models do not reveal private information. An alternative approach, which this paper studies, is to use a sensitive dataset to…

Machine Learning · Computer Science 2024-01-12 Alexey Kurakin , Natalia Ponomareva , Umar Syed , Liam MacDermed , Andreas Terzis

The increasing availability of sensitive textual data has created an urgent need for robust de-identification methods that enable compliant data sharing while preserving downstream utility. This paper presents DeID-Clinic, a multi-layered…

Computation and Language · Computer Science 2026-05-26 Angel Paul , Dhivin Shaji , Lifeng Han , Warren Del-Pinto , Goran Nenadic , Suzan Verberne

Unstructured textual data are at the heart of health systems: liaison letters between doctors, operating reports, coding of procedures according to the ICD-10 standard, etc. The details included in these documents make it possible to get to…

Cryptography and Security · Computer Science 2023-10-09 Yakini Tchouka , Jean-François Couchot , Maxime Coulmeau , David Laiymani , Philippe Selles , Azzedine Rahmani

Neural language models (LMs) are vulnerable to training data extraction attacks due to data memorization. This paper introduces a novel attack scenario wherein an attacker adversarially fine-tunes pre-trained LMs to amplify the exposure of…

Computation and Language · Computer Science 2024-09-04 Myung Gyo Oh , Hong Eun Ahn , Leo Hyun Park , Taekyoung Kwon

Pre-trained models, e.g., from ImageNet, have proven to be effective in boosting the performance of many downstream applications. It is too demanding to acquire large-scale annotations to build such models for medical imaging. Meanwhile,…

Computer Vision and Pattern Recognition · Computer Science 2021-03-31 Xiaosong Wang , Ziyue Xu , Leo Tam , Dong Yang , Daguang Xu

Self-supervised learning has emerged as a powerful approach for leveraging large-scale unlabeled data to improve model performance in various domains. In this paper, we explore masked self-supervised pre-training for text recognition…

Computer Vision and Pattern Recognition · Computer Science 2025-03-31 Martin Kišš , Michal Hradiš

Learning high-quality text representations is fundamental to a wide range of NLP tasks. While encoder pretraining has traditionally relied on Masked Language Modeling (MLM), recent evidence suggests that decoder models pretrained with…

Recent research advances achieve human-level accuracy for de-identifying free-text clinical notes on research datasets, but gaps remain in reproducing this in large real-world settings. This paper summarizes lessons learned from building a…

Computation and Language · Computer Science 2023-12-15 Veysel Kocaman , Hasham Ul Haq , David Talby

In this work, we propose a novel problem formulation for de-identification of unstructured clinical text. We formulate the de-identification problem as a sequence to sequence learning problem instead of a token classification problem. Our…

Computation and Language · Computer Science 2021-09-13 Md Monowar Anjum , Noman Mohammed , Xiaoqian Jiang
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