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Foundation models have made significant strides in understanding the genomic language of DNA sequences. However, previous models typically adopt the tokenization methods designed for natural language, which are unsuitable for DNA sequences…

Genomics · Quantitative Biology 2024-12-19 Lifeng Qiao , Peng Ye , Yuchen Ren , Weiqiang Bai , Chaoqi Liang , Xinzhu Ma , Nanqing Dong , Wanli Ouyang

Variation in language is ubiquitous and often systematically linked to regional, social, and contextual factors. Tokenizers split texts into smaller units and might behave differently for less common linguistic forms. This might affect…

Computation and Language · Computer Science 2025-07-08 Anna Wegmann , Dong Nguyen , David Jurgens

We propose a Deep Texture Encoding Network (Deep-TEN) with a novel Encoding Layer integrated on top of convolutional layers, which ports the entire dictionary learning and encoding pipeline into a single model. Current methods build from…

Computer Vision and Pattern Recognition · Computer Science 2016-12-12 Hang Zhang , Jia Xue , Kristin Dana

Masked language modeling has become a standard pretraining objective for training encoder-based language models. In this approach, certain tokens in the input are masked, and the model learns to predict them using the surrounding context.…

Artificial Intelligence · Computer Science 2026-05-28 Gokul Srinivasagan , Kai Hartung , Munir Georges

Many multi-domain neural machine translation (NMT) models achieve knowledge transfer by enforcing one encoder to learn shared embedding across domains. However, this design lacks adaptation to individual domains. To overcome this…

Computation and Language · Computer Science 2021-02-15 Haoming Jiang , Chen Liang , Chong Wang , Tuo Zhao

Generative models have been widely applied to solve extractive tasks, where parts of the input is extracted to form the desired output, and achieved significant success. For example, in extractive question answering (QA), generative models…

Computation and Language · Computer Science 2023-10-26 Kaiser Sun , Peng Qi , Yuhao Zhang , Lan Liu , William Yang Wang , Zhiheng Huang

Audio tokenization has emerged as a critical component in end-to-end audio language models, enabling efficient discrete representation learning for both audio understanding and generation tasks. However, existing audio tokenizers face…

Audio and Speech Processing · Electrical Eng. & Systems 2026-04-15 Xiangyu Zhang , Benjamin John Southwell , Siqi Pan , Xinlei Niu , Beena Ahmed , Julien Epps

Recent advancements in large language models (LLMs) have remarkably enhanced performances on a variety of tasks in multiple languages. However, tokenizers in LLMs trained primarily on English-centric corpora often overly fragment a text…

Computation and Language · Computer Science 2024-08-07 Jimin Hong , Gibbeum Lee , Jaewoong Cho

In recent years, named entity recognition has always been a popular research in the field of natural language processing, while traditional deep learning methods require a large amount of labeled data for model training, which makes them…

Computation and Language · Computer Science 2022-03-29 Yuan Shi

Deep learning approaches for sentiment classification do not fully exploit sentiment linguistic knowledge. In this paper, we propose a Multi-sentiment-resource Enhanced Attention Network (MEAN) to alleviate the problem by integrating three…

Computation and Language · Computer Science 2018-07-16 Zeyang Lei , Yujiu Yang , Min Yang , Yi Liu

Scientific progress increasingly depends on synthesizing knowledge across vast literature, yet most experimental data remains trapped in semi-structured formats that resist systematic extraction and analysis. Here, we present MatSKRAFT, a…

Information Retrieval · Computer Science 2025-09-15 Kausik Hira , Mohd Zaki , Mausam , N. M. Anoop Krishnan

In this work, we significantly enhance masked particle modeling (MPM), a self-supervised learning scheme for constructing highly expressive representations of unordered sets relevant to developing foundation models for high-energy physics.…

High Energy Physics - Phenomenology · Physics 2024-10-02 Matthew Leigh , Samuel Klein , François Charton , Tobias Golling , Lukas Heinrich , Michael Kagan , Inês Ochoa , Margarita Osadchy

Linguistic knowledge has brought great benefits to scene text recognition by providing semantics to refine character sequences. However, since linguistic knowledge has been applied individually on the output sequence, previous methods have…

Computer Vision and Pattern Recognition · Computer Science 2022-08-16 Byeonghu Na , Yoonsik Kim , Sungrae Park

This paper proposes a fundamentally new paradigm for image generation through set-based tokenization and distribution modeling. Unlike conventional methods that serialize images into fixed-position latent codes with a uniform compression…

Computer Vision and Pattern Recognition · Computer Science 2025-03-21 Zigang Geng , Mengde Xu , Han Hu , Shuyang Gu

Current language models (LMs) use a fixed, static subword tokenizer. This default choice typically results in degraded efficiency and language capabilities, especially in languages other than English. To address this issue, we challenge the…

Computation and Language · Computer Science 2025-06-12 Darius Feher , Ivan Vulić , Benjamin Minixhofer

In the materials design domain, much of the data from materials calculations are stored in different heterogeneous databases. Materials databases usually have different data models. Therefore, the users have to face the challenges to find…

Databases · Computer Science 2020-11-06 Huanyu Li , Rickard Armiento , Patrick Lambrix

This paper introduces DashengTokenizer, a continuous audio tokenizer engineered for joint use in both understanding and generation tasks. Unlike conventional approaches, which train acoustic tokenizers and subsequently integrate frozen…

Fuzzy string matching and language classification are important tools in Natural Language Processing pipelines, this paper provides advances in both areas. We propose a fast novel approach to string tokenisation for fuzzy language matching…

Computation and Language · Computer Science 2020-09-25 Malgorzata Pikies , Andronicus Riyono , Junade Ali

Medical concept normalization helps in discovering standard concepts in free-form text i.e., maps health-related mentions to standard concepts in a vocabulary. It is much beyond simple string matching and requires a deep semantic…

Computation and Language · Computer Science 2020-06-09 Katikapalli Subramanyam Kalyan , S. Sangeetha

Subword tokenization is a common method for vocabulary building in Neural Machine Translation (NMT) models. However, increasingly complex tasks have revealed its disadvantages. First, a vocabulary cannot be modified once it is learned,…

Computation and Language · Computer Science 2024-08-13 Langlin Huang , Yang Feng
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