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Sparse Autoencoder (SAE) has emerged as a powerful tool for mechanistic interpretability of large language models. Recent works apply SAE to protein language models (PLMs), aiming to extract and analyze biologically meaningful features from…

Quantitative Methods · Quantitative Biology 2026-01-21 Xiangyu Liu , Haodi Lei , Yi Liu , Yang Liu , Wei Hu

A central goal of interpretability is to recover representations of causally relevant concepts from the activations of neural networks. The quality of these concept representations is typically evaluated in isolation, and under implicit…

Machine Learning · Computer Science 2025-12-18 Aaron Mueller , Andrew Lee , Shruti Joshi , Ekdeep Singh Lubana , Dhanya Sridhar , Patrik Reizinger

Understanding internal representations of neural models is a core interest of mechanistic interpretability. Due to its large dimensionality, the representation space can encode various aspects about inputs. To what extent are different…

Machine Learning · Computer Science 2026-05-15 Xinting Huang , Michael Hahn

Understanding the internal representations of large language models (LLMs) is a central challenge in interpretability research. Existing feature interpretability methods often rely on strong assumptions about the structure of…

Machine Learning · Computer Science 2025-09-30 Yifan Luo , Zhennan Zhou , Bin Dong

Interpretable machine learning has exploded as an area of interest over the last decade, sparked by the rise of increasingly large datasets and deep neural networks. Simultaneously, large language models (LLMs) have demonstrated remarkable…

Computation and Language · Computer Science 2024-02-06 Chandan Singh , Jeevana Priya Inala , Michel Galley , Rich Caruana , Jianfeng Gao

What types of numeric representations emerge in neural systems, and what would a satisfying answer to this question look like? In this work, we interpret Neural Network (NN) solutions to sequence based number tasks using a variety of…

Machine Learning · Computer Science 2025-08-19 Satchel Grant , Noah D. Goodman , James L. McClelland

In complex inferential tasks like question answering, machine learning models must confront two challenges: the need to implement a compositional reasoning process, and, in many applications, the need for this reasoning process to be…

Computer Vision and Pattern Recognition · Computer Science 2019-03-08 Ronghang Hu , Jacob Andreas , Trevor Darrell , Kate Saenko

Nonnegative matrix factorization (NMF) with group sparsity constraints is formulated as a probabilistic graphical model and, assuming some observed data have been generated by the model, a feasible variational Bayesian algorithm is derived…

Computer Vision and Pattern Recognition · Computer Science 2014-05-28 Ivan Ivek

The reasonable definition of semantic interpretability presents the core challenge in explainable AI. This paper proposes a method to modify a traditional convolutional neural network (CNN) into an interpretable compositional CNN, in order…

Computer Vision and Pattern Recognition · Computer Science 2021-07-12 Wen Shen , Zhihua Wei , Shikun Huang , Binbin Zhang , Jiaqi Fan , Ping Zhao , Quanshi Zhang

Logic-based machine learning aims to learn general, interpretable knowledge in a data-efficient manner. However, labelled data must be specified in a structured logical form. To address this limitation, we propose a neural-symbolic learning…

Machine Learning · Computer Science 2023-01-06 Daniel Cunnington , Mark Law , Alessandra Russo , Jorge Lobo

Recent efforts in Machine Learning (ML) interpretability have focused on creating methods for explaining black-box ML models. However, these methods rely on the assumption that simple approximations, such as linear models or decision-trees,…

Machine Learning · Computer Science 2019-06-13 Owen Lahav , Nicholas Mastronarde , Mihaela van der Schaar

Large language models often produce human-like moral judgments, but it is unclear whether this reflects an internal conceptual structure or superficial ``moral mimicry.'' Using Moral Foundations Theory (MFT) as an analytic framework, we…

Computation and Language · Computer Science 2026-05-20 Chenxiao Yu , Bowen Yi , Farzan Karimi-Malekabadi , Suhaib Abdurahman , Jinyi Ye , Shrikanth Narayanan , Yue Zhao , Morteza Dehghani

This paper explores the mechanistic interpretability of reinforcement learning (RL) agents through an analysis of a neural network trained on procedural maze environments. By dissecting the network's inner workings, we identified…

Machine Learning · Computer Science 2024-11-05 Tristan Trim , Triston Grayston

There has been a lot of interest in understanding what information is captured by hidden representations of language models (LMs). Typically, interpretation methods i) do not guarantee that the model actually uses the encoded information,…

Computation and Language · Computer Science 2021-12-14 Nicola De Cao , Leon Schmid , Dieuwke Hupkes , Ivan Titov

Intelligible speech is produced by creating varying internal local muscle groupings -- i.e., functional units -- that are generated in a systematic and coordinated manner. There are two major challenges in characterizing and analyzing…

Computer Vision and Pattern Recognition · Computer Science 2021-06-08 Jonghye Woo , Fangxu Xing , Jerry L. Prince , Maureen Stone , Arnold Gomez , Timothy G. Reese , Van J. Wedeen , Georges El Fakhri

Large Language Models (LLMs) have experienced a rapid rise in AI, changing a wide range of applications with their advanced capabilities. As these models become increasingly integral to decision-making, the need for thorough…

Machine Learning · Computer Science 2024-01-09 Jatin Nainani

Large Language Models (LLMs) excel in complex reasoning tasks but struggle with consistent rule application, exception handling, and explainability, particularly in domains like legal analysis that require both natural language…

Artificial Intelligence · Computer Science 2025-11-11 Albert Sadowski , Jarosław A. Chudziak

Sparse Autoencoders (SAEs) provide potentials for uncovering structured, human-interpretable representations in Large Language Models (LLMs), making them a crucial tool for transparent and controllable AI systems. We systematically analyze…

Machine Learning · Computer Science 2026-02-03 Jack Gallifant , Shan Chen , Kuleen Sasse , Hugo Aerts , Thomas Hartvigsen , Danielle S. Bitterman

Predicting high-dimensional or extreme multilabels, such as in medical coding, requires both accuracy and interpretability. Existing works often rely on local interpretability methods, failing to provide comprehensive explanations of the…

Computation and Language · Computer Science 2025-03-25 John Wu , David Wu , Jimeng Sun

As language models (LMs) deliver increasing performance on a range of NLP tasks, probing classifiers have become an indispensable technique in the effort to better understand their inner workings. A typical setup involves (1) defining an…

Computation and Language · Computer Science 2024-08-01 Charles Jin , Martin Rinard
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