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Code repair is a fundamental task in software development, facilitating efficient bug resolution and software maintenance. Although large language models (LLMs) have demonstrated considerable potential in automated code repair, their…

Software Engineering · Computer Science 2026-02-27 Dekun Dai , MingWei Liu , Anji Li , Jialun Cao , Yanlin Wang , Chong Wang , Xin Peng , Zibin Zheng

Algorithmic bias often arises as a result of differential subgroup validity, in which predictive relationships vary across groups. For example, in toxic language detection, comments targeting different demographic groups can vary markedly…

Machine Learning · Computer Science 2023-03-08 Soumyajit Gupta , Sooyong Lee , Maria De-Arteaga , Matthew Lease

Multimodal large language models (LLMs) are increasingly used to generate dermatology diagnostic narratives directly from images. However, reliable evaluation remains the primary bottleneck for responsible clinical deployment. We introduce…

Computer Vision and Pattern Recognition · Computer Science 2026-01-13 Yuhao Shen , Jiahe Qian , Shuping Zhang , Zhangtianyi Chen , Tao Lu , Juexiao Zhou

There is a growing interest in the role that LLMs play in chemistry which lead to an increased focus on the development of LLMs benchmarks tailored to chemical domains to assess the performance of LLMs across a spectrum of chemical tasks…

There is vivid research on adapting Large Language Models (LLMs) to perform a variety of tasks in high-stakes domains such as healthcare. Despite their popularity, there is a lack of understanding of the extent and contributing factors that…

Computation and Language · Computer Science 2024-06-07 Anand Subramanian , Viktor Schlegel , Abhinav Ramesh Kashyap , Thanh-Tung Nguyen , Vijay Prakash Dwivedi , Stefan Winkler

Large Language Models (LLMs) have achieved remarkable success in code generation, and the race to improve their performance has become a central focus of AI research. Benchmarks and leaderboards are increasingly popular, offering…

Software Engineering · Computer Science 2025-11-07 Amir Molzam Sharifloo , Maedeh Heydari , Parsa Kazerooni , Daniel Maninger , Mira Mezini

Large Language Models (LLMs) have recently demonstrated remarkable performance in general tasks across various fields. However, their effectiveness within specific domains such as drug development remains challenges. To solve these…

Artificial Intelligence · Computer Science 2024-10-16 Tengfei Ma , Xuan Lin , Tianle Li , Chaoyi Li , Long Chen , Peng Zhou , Xibao Cai , Xinyu Yang , Daojian Zeng , Dongsheng Cao , Xiangxiang Zeng

Molecules play a crucial role in biomedical research and discovery, particularly in the field of small molecule drug development. Given the rapid advancements in large language models, especially the recent emergence of reasoning models, it…

Artificial Intelligence · Computer Science 2025-12-12 Chenyang Zuo , Siqi Fan , Zaiqing Nie

Large Language Models demonstrate substantial promise for advancing scientific discovery, yet their deployment in disciplines demanding factual precision and specialized domain constraints presents significant challenges. Within molecular…

Machine Learning · Computer Science 2026-02-23 Malikussaid , Hilal Hudan Nuha , Isman Kurniawan

Drug repurposing is often framed as a candidate identification task, but existing approaches provide limited guidance for distinguishing biologically plausible candidates from historically well-connected ones. Here we introduce DrugKLM, a…

A persistent challenge in machine learning for scientific applications is jointly achieving prediction and understanding. Statistical models excel on structured data but operate as black boxes, while existing interpretability methods are…

Machine Learning · Computer Science 2026-05-25 Mohammad R. Rezaei , Rahul G. Krishnan

Toxicity detection in multimodal text-image content faces growing challenges, especially with multimodal implicit toxicity, where each modality appears benign on its own but conveys hazard when combined. Multimodal implicit toxicity appears…

Multimedia · Computer Science 2025-05-21 Shiyao Cui , Qinglin Zhang , Xuan Ouyang , Renmiao Chen , Zhexin Zhang , Yida Lu , Hongning Wang , Han Qiu , Minlie Huang

The significant advancements in Large Language Models (LLMs) have resulted in their widespread adoption across various tasks within Software Engineering (SE), including vulnerability detection and repair. Numerous studies have investigated…

Software Engineering · Computer Science 2024-10-08 Xin Zhou , Sicong Cao , Xiaobing Sun , David Lo

Current benchmarks for evaluating the chemical reasoning capabilities of Large Language Models (LLMs) are limited by oversimplified tasks, lack of process-level evaluation, and misalignment with expert-level chemistry skills. To address…

This technical report aims to fill a deficiency in the assessment of large multimodal models (LMMs) by specifically examining the self-consistency of their outputs when subjected to common corruptions. We investigate the cross-modal…

Machine Learning · Computer Science 2024-01-23 Jiawei Zhang , Tianyu Pang , Chao Du , Yi Ren , Bo Li , Min Lin

Optimization modeling underpins decision-making in logistics, manufacturing, energy, and finance, yet translating natural-language requirements into correct optimization formulations and solver-executable code remains labor-intensive.…

Machine Learning · Computer Science 2026-05-27 Zhong Li , Hongliang Lu , Tao Wei , Yuxuan Chen , Wenyu Liu , Yuan Lan , Fan Zhang , Zaiwen Wen

Predictive analysis is a cornerstone of modern decision-making, with applications in various domains. Large Language Models (LLMs) have emerged as powerful tools in enabling nuanced, knowledge-intensive conversations, thus aiding in complex…

Computation and Language · Computer Science 2025-05-26 Qin Chen , Yuanyi Ren , Xiaojun Ma , Yuyang Shi

Multimodal Large Language Models (MLLMs) have enabled transformative advancements across diverse applications but remain susceptible to safety threats, especially jailbreak attacks that induce harmful outputs. To systematically evaluate and…

Large Language Models (LLM) benchmarks tell us when models fail, but not why they fail. A wrong answer on a reasoning dataset may stem from formatting issues, calculation errors, or dataset noise rather than weak reasoning. Without…

Artificial Intelligence · Computer Science 2026-02-18 Shir Ashury-Tahan , Yifan Mai , Elron Bandel , Michal Shmueli-Scheuer , Leshem Choshen

The extraction of molecular structures and reaction data from scientific documents is challenging due to their varied, unstructured chemical formats and complex document layouts. To address this, we introduce MolMole, a vision-based deep…

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