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Motivated by applications in single-cell biology and metagenomics, we investigate the problem of matrix reordering based on a noisy disordered monotone Toeplitz matrix model. We establish the fundamental statistical limit for this problem…

Statistics Theory · Mathematics 2023-08-15 T. Tony Cai , Rong Ma

Sparse matrix-vector multiplication (SpMV) is a central building block for scientific software and graph applications. Recently, heterogeneous processors composed of different types of cores attracted much attention because of their…

Mathematical Software · Computer Science 2015-09-15 Weifeng Liu , Brian Vinter

Sparse tensor computing is a core computational part of numerous applications in areas such as data science, graph processing, and scientific computing. Sparse tensors offer the potential of skipping unnecessary computations caused by zero…

Hardware Architecture · Computer Science 2023-03-28 Midia Reshadi , David Gregg

We present an algorithm to reduce the computational effort for the multiplication of a given matrix with an unknown column vector. The algorithm decomposes the given matrix into a product of matrices whose entries are either zero or integer…

Information Theory · Computer Science 2020-02-28 Ralf R. Müller , Bernhard Gäde , Ali Bereyhi

Iterative solutions of sparse linear systems and sparse eigenvalue problems have a fundamental role in vital fields of scientific research and engineering. The crucial computing kernel for such iterative solutions is the multiplication of a…

Data Structures and Algorithms · Computer Science 2022-12-16 Thaha Mohammed , Rashid Mehmood

We consider the problem of sparse matrix multiplication by the column row method in a distributed setting where the matrix product is not necessarily sparse. We present a surprisingly simple method for "consistent" parallel processing of…

Data Structures and Algorithms · Computer Science 2012-11-20 Andrea Campagna , Konstantin Kutzkov , Rasmus Pagh

The multiplication of a sparse matrix with a dense vector (SpMV) is a key component in many numerical schemes and its performance is known to be severely limited by main memory access. Several numerical schemes require the multiplication of…

Numerical Analysis · Mathematics 2023-01-11 Christie L. Alappat , Georg Hager , Olaf Schenk , Gerhard Wellein

The matrices used in many computational settings are naturally sparse, holding a small percentage of nonzero elements. Storing such matrices in specialized sparse formats enables algorithms that avoid wasting computation on zeros,…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-13 Pratyush Das , Amirhossein Basareh , Adhitha Dias , Artem Pelenitsyn , Kirshanthan Sundararajah , Milind Kulkarni , Ben Delaware

Matrix Factorization (MF) has been widely applied in machine learning and data mining. A large number of algorithms have been studied to factorize matrices. Among them, stochastic gradient descent (SGD) is a commonly used method.…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-30 Yuanhang Yu , Dong Wen , Ying Zhang , Xiaoyang Wang , Wenjie Zhang , Xuemin Lin

Sparse matrix computation is crucial in various modern applications, including large-scale graph analytics, deep learning, and recommender systems. The performance of sparse kernels varies greatly depending on the structure of the input…

Hardware Architecture · Computer Science 2024-07-31 Francesco Sgherzi , Marco Siracusa , Ivan Fernandez , Adrià Armejach , Miquel Moretó

Gradient descent optimizations and backpropagation are the most common methods for training neural networks, but they are computationally expensive for real time applications, need high memory resources, and are difficult to converge for…

Machine Learning · Computer Science 2022-07-05 Seyyed Mostafa Mousavi Janbeh Sarayi , Mansour Nikkhah Bahrami

This paper describes a novel approach of packing sparse convolutional neural networks for their efficient systolic array implementations. By combining subsets of columns in the original filter matrix associated with a convolutional layer,…

Machine Learning · Computer Science 2018-11-13 H. T. Kung , Bradley McDanel , Sai Qian Zhang

Block encoding of sparse matrices underpins powerful quantum algorithms such as quantum singular value transformation, Hamiltonian simulation, and quantum linear solvers, yet its efficient gate-level realization for general sparse matrices…

Quantum Physics · Physics 2026-04-07 Abhishek Setty

Sparse matrix-matrix multiplication (SpGEMM) is a computational primitive that is widely used in areas ranging from traditional numerical applications to recent big data analysis and machine learning. Although many SpGEMM algorithms have…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-06-27 Yusuke Nagasaka , Satoshi Matsuoka , Ariful Azad , Aydın Buluç

Sequence models such as transformers require inputs to be represented as one-dimensional sequences. In vision, this typically involves flattening images using a fixed row-major (raster-scan) order. While full self-attention is…

Machine Learning · Computer Science 2025-10-24 Declan Kutscher , David M. Chan , Yutong Bai , Trevor Darrell , Ritwik Gupta

Runtime characteristics of sparse matrix computations and related processes may be often improved by reducing memory footprints of involved matrices. Such a reduction can be usually achieved when matrices are processed in a block-wise…

Numerical Analysis · Computer Science 2018-01-01 Daniel Langr

We present a matrix-factorization algorithm that scales to input matrices with both huge number of rows and columns. Learned factors may be sparse or dense and/or non-negative, which makes our algorithm suitable for dictionary learning,…

Machine Learning · Statistics 2017-11-15 Arthur Mensch , Julien Mairal , Bertrand Thirion , Gael Varoquaux

Sparse Principal Component Analysis (sPCA) is a popular matrix factorization approach based on Principal Component Analysis (PCA) that combines variance maximization and sparsity with the ultimate goal of improving data interpretation. When…

Machine Learning · Statistics 2020-11-19 J. Camacho , A. K. Smilde , E. Saccenti , J. A. Westerhuis

Machine learning (ML) models are widely used in many important domains. For efficiently processing these computational- and memory-intensive applications, tensors of these over-parameterized models are compressed by leveraging sparsity,…

Hardware Architecture · Computer Science 2021-08-11 Shail Dave , Riyadh Baghdadi , Tony Nowatzki , Sasikanth Avancha , Aviral Shrivastava , Baoxin Li

We design and develop a work-efficient multithreaded algorithm for sparse matrix-sparse vector multiplication (SpMSpV) where the matrix, the input vector, and the output vector are all sparse. SpMSpV is an important primitive in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-26 Ariful Azad , Aydin Buluc