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Related papers: HER2 Expression Prediction with Flexible Multi-Mod…

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In medical image analysis, achieving fast, efficient, and accurate segmentation is essential for automated diagnosis and treatment. Although recent advancements in deep learning have significantly improved segmentation accuracy, current…

Computer Vision and Pattern Recognition · Computer Science 2024-12-02 Zhi Li , Kai Zhao , Yaqi Wang , Shuai Wang

Multimodal pathology-genomic analysis is critical for cancer survival prediction. However, existing approaches predominantly integrate formalin-fixed paraffin-embedded (FFPE) slides with genomic data, while neglecting the availability of…

Computer Vision and Pattern Recognition · Computer Science 2025-06-25 Mingcheng Qu , Guang Yang , Donglin Di , Yue Gao , Tonghua Su , Yang Song , Lei Fan

EEG-based visual neural decoding aims to align neural responses with visual stimuli for tasks such as image retrieval. However, limited paired data and a fundamental mismatch between high-fidelity digital images and biological visual…

Computer Vision and Pattern Recognition · Computer Science 2026-05-07 Jingtao Liu , Peiliang Gong , Chuhang Zheng , Yiheng Liu , Qi Zhu

Human epidermal growth factor receptor 2 (HER2) is an important prognostic and predictive factor which is overexpressed in 15-20% of breast cancer (BCa). The determination of its status is a key clinical decision making step for selection…

Computer Vision and Pattern Recognition · Computer Science 2021-10-13 Wenqi Lu , Michael Toss , Emad Rakha , Nasir Rajpoot , Fayyaz Minhas

Autonomous agents perceive and interpret their surroundings by integrating multimodal inputs, such as vision, audio, and LiDAR. These perceptual modalities support retrieval tasks, such as place recognition in robotics. However, current…

Computer Vision and Pattern Recognition · Computer Science 2024-11-27 Po-han Li , Yunhao Yang , Mohammad Omama , Sandeep Chinchali , Ufuk Topcu

Multimodal Machine Learning offers a holistic view of a patient's status, integrating structured and unstructured data from electronic health records (EHR). We propose a framework to predict metastasis risk one month prior to diagnosis,…

Machine Learning · Computer Science 2026-04-01 Franco Rugolon , Korbinian Randl , Braslav Jovanovic , Ioanna Miliou , Panagiotis Papapetrou

It is a critical task to evalaute HER2 expression level accurately for breast cancer evaluation and targeted treatment therapy selection. However, the standard multi-step Immunohistochemistry (IHC) staining is resource-intensive, expensive,…

Computer Vision and Pattern Recognition · Computer Science 2026-02-23 Peide Zhu , Linbin Lu , Zhiqin Chen , Xiong Chen

B-mode ultrasound for breast cancer diagnosis faces challenges: speckle, operator dependency, and indistinct boundaries. Existing deep learning suffers from single-task learning, architectural constraints (CNNs lack global context,…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Mohammad Amanour Rahman

Cancer survival prediction using multi-modal medical imaging presents a critical challenge in oncology, mainly due to the vulnerability of deep learning models to noise and protocol variations across imaging centers. Current approaches…

Image and Video Processing · Electrical Eng. & Systems 2025-05-06 Aiman Farooq , Azad Singh , Deepak Mishra , Santanu Chaudhury

Aims Late diagnosis of Oral Squamous Cell Carcinoma (OSCC) contributes significantly to its high global mortality rate, with over 50\% of cases detected at advanced stages and a 5-year survival rate below 50\% according to WHO statistics.…

Computer Vision and Pattern Recognition · Computer Science 2025-10-07 Ajo Babu George , Sreehari J R Ajo Babu George , Sreehari J R Ajo Babu George , Sreehari J R

Automatic emotion recognition (AER) based on enriched multimodal inputs, including text, speech, and visual clues, is crucial in the development of emotionally intelligent machines. Although complex modality relationships have been proven…

Multimedia · Computer Science 2021-09-16 Shuyun Tang , Zhaojie Luo , Guoshun Nan , Yuichiro Yoshikawa , Ishiguro Hiroshi

With the increasing demand of massive multimodal data storage and organization, cross-modal retrieval based on hashing technique has drawn much attention nowadays. It takes the binary codes of one modality as the query to retrieve the…

Computer Vision and Pattern Recognition · Computer Science 2017-08-25 Xuelong Li , Di Hu , Feiping Nie

Early recurrence (ER) prediction after curative-intent resection remains a critical challenge in the clinical management of hepatocellular carcinoma (HCC). Although contrast-enhanced computed tomography (CT) with full multi-phase…

Quantitative Methods · Quantitative Biology 2025-10-10 Hsin-Pei Yu , Si-Qin Lyu , Yi-Hsien Hsieh , Weichung Wang , Tung-Hung Su , Jia-Horng Kao , Che Lin

Molecular and genomic properties are critical in selecting cancer treatments to target individual tumors, particularly for immunotherapy. However, the methods to assess such properties are expensive, time-consuming, and often not routinely…

Image and Video Processing · Electrical Eng. & Systems 2022-11-29 Heather D. Couture

A key challenge in learning from multimodal biological data is missing modalities, where data from one or more modalities are absent for some patients. Existing approaches either exclude patients with missing modalities, impute missing…

Machine Learning · Computer Science 2026-05-19 Sina Tabakhi , Chen , Chen , Haiping Lu

Virtual staining is a promising technique that uses deep generative models to recreate histological stains, providing a faster and more cost-effective alternative to traditional tissue chemical staining. Specifically for H&E-HER2 staining…

Image and Video Processing · Electrical Eng. & Systems 2025-10-02 Pascal Klöckner , José Teixeira , Diana Montezuma , Jaime S. Cardoso , Hugo M. Horlings , Sara P. Oliveira

Segment Anything Model 2 (SAM2) demonstrated impressive zero-shot capabilities on natural images but faces challenges in biomedical segmentation due to significant domain shifts and prompt dependency. To address these limitations, we…

Computer Vision and Pattern Recognition · Computer Science 2026-05-08 Hinako Mitsuoka , Kazuhiro Hotta

Predicting spatial gene expression from H&E histology offers a scalable and clinically accessible alternative to sequencing, but realizing clinical impact requires models that generalize across cancer types and capture biologically coherent…

Machine Learning · Computer Science 2026-02-10 Susu Hu , Qinghe Zeng , Nithya Bhasker , Jakob Nikolas Kather , Stefanie Speidel

Antibody binding site prediction plays a pivotal role in computational immunology and therapeutic antibody design. Existing sequence or structure methods rely on single-view features and fail to identify antibody-specific binding sites on…

Machine Learning · Computer Science 2025-09-12 Hongzong Li , Jiahao Ma , Zhanpeng Shi , Rui Xiao , Fanming Jin , Ye-Fan Hu , Hangjun Che , Jian-Dong Huang

Effective understanding of a disease such as cancer requires fusing multiple sources of information captured across physical scales by multimodal data. In this work, we propose a novel feature embedding module that derives from canonical…

Machine Learning · Computer Science 2021-03-10 Vaishnavi Subramanian , Tanveer Syeda-Mahmood , Minh N. Do